Exaiptasia diaphana (Aiptasia): 110248152
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Entry
110248152 CDS
T05080
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 34
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110248152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110248152
03400 DNA repair and recombination proteins [BR:
epa03400
]
110248152
Enzymes [BR:
epa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110248152
Messenger RNA biogenesis [BR:
epa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
110248152
DNA repair and recombination proteins [BR:
epa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
110248152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RecQ_Zn_bind
AAA-ATPase_like
Motif
Other DBs
NCBI-GeneID:
110248152
NCBI-ProteinID:
XP_020910309
UniProt:
A0A913XV78
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MASLEHAFDVVSTKFGIQSLNHHQKSAITTIVEEGRDIFINVPTGFGKSLIYQSLPLVFD
VTKEDHGHIAVVVSPLTSLMNDQVAYLKKIGINSVSISSIEEEVRRSVESGGYSIVFGSP
ESXLKNERWRSMLSNEVYSKKLCAIAIXEAHVXRQWGVSNDKKMAAFXESYSKLYXLRSL
APQVPFLALTATATQLTKSTIITLLHMDNVHEIKEXTNKLNIAYSVQRIDKDMELQCYFD
WLXDELKQNKEKTERTIIYCQTIRQCGIIYGNIKSLMADKMYVGXTARSTLVELLHSCTP
AANKEHVLQSFQSETGTVRLLIATIAFGMGIDCKGVQRVIHFGPSKTIESYVQETGRAGR
NGKQSMAYILFNGVMMTHVDAEMKQFISTKECRRKTLLKHFEDTITAPVQRHLCCDNCAA
KCGVCIPHITKYPACLVDDNFVSSNACLERQVSKQQMDIVKDELTKYHKSIMMQLVGSTA
NGDVKTLTNPQFMLGFSXVQILQVLNNVQRIFSMKDVYNFVEIWDRQHACAIYSIIGLVF
GDJDGNSAVHVLEDCEDIEFTEDLLDEWHNILQDXELYEMIIDNISLSQLENSSFEDAGE
ISFDVLXSAVLSTVGNMTLDSL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctcgaacatgcattcgatgttgtgagcacaaaatttggtattcagagtcta
aatcatcatcaaaaatctgcgataacgaccattgtcgaagaaggaagggatattttcatc
aatgtaccaacgggctttggaaagtcactaatttatcaatccctaccgttagttttcgat
gtgacaaaggaagatcatggtcacattgccgtcgttgtatcacctttgacgagtcttatg
aatgaccaggtagcttatttgaagaaaattggaatcaactcggtcagtataagctcaata
gaagaagaagtgcgaagatccgttgaaagtggcggatattcaattgtttttggttcgccc
gagtcatgrttgaagaatgagcgctggaggtcaatgctttcaaatgaagtctattctaaa
aagttgtgtgctatagcaattkatgaagcycacgttrtgcgacagtggggtgtatcaaac
gacaagaaaatggccgccttcaragaatcctactcaaagttgtatragctacgttcactt
gctcctcaagttccattcttggcattgacagcaacagcaacgcagcttacsaagagtaca
ataataacacttctacacatggacaatgttcatgaaatcaaagaaakyactaacaaactg
aacattgcttacagtgtgcaaaggattgataaagatatggaattacaatgttattttgat
tggttaamagatgaattgaagcagaataaagaaaaaacagagagaacaattatatattgt
caaactataaggcagtgtggaattatatatggcaatatcaaatcccttatggcagataaa
atgtatgttggagasactgcaagaagcactcttgtagaattgctgcactcatgcactcca
gctgcaaataaagaacatgtactgcaatctttccaatcagaaactggaacagtacggtta
ctgatagcaacgatcgcctttggaatgggtatagactgtaaaggtgtccaaagggtcatt
cattttgggccctcaaaaactattgaatcgtatgttcaggaaactggtcgagcaggaaga
aatggcaaacaaagcatggcatacatactatttaatggtgtaatgatgactcatgttgac
gcagaaatgaagcagttcatcagtacaaaagaatgtagaaggaaaactcttttaaaacat
tttgaagatactattactgctcctgtacaacgtcacctttgttgtgataattgtgctgca
aaatgtggtgtttgtattccacacatcaccaaatatccagcttgtctggttgatgataac
tttgtttcatcaaatgcatgtctggaaagacaggtgtcaaagcaacaaatggacattgtm
aaagatgaactgacaaaatatcacaagtccatcatgatgcaattggttggatccacagca
aacggtgatgtaaaaaccctcactaacccacaatttatgcttggcttctcaraggtgcaa
atcttgcaagttttgaataacgtacaaagaattttctctatgaaagatgtttataatttt
gtagaaatatgggacagacagcatgcttgtgctatttattccatcattggcttggtattt
ggagacwtagatggcaacagtgctgtgcatgtgttagaggattgtgaagatattgaattc
actgaagacctacttgacgagtggcataatattttacaagatgrtgaattgtatgagatg
attattgacaacatatcattgtcacaactcgaaaactcttcctttgaagatgccggtgaa
atcagttttgatgtgctccmctcagcagttttatctacagtcggaaatatgacactggac
agtttgtga
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