Exaiptasia diaphana (Aiptasia): 110248406
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Entry
110248406 CDS
T05080
Name
(RefSeq) cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110248406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110248406
Messenger RNA biogenesis [BR:
epa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110248406
U7-dependent histone pre-mRNA processing factors
110248406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110248406
NCBI-ProteinID:
XP_020910588
UniProt:
A0A913XVR8
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MAAALLDNQQKQSTNLFAADRSLRSVFVGNIPYEASEEQLKEIFSEVGPVVSFRLVFDRE
TGKPKGYGFCEYKDQETALSAMRNLNGYELNGRALRVDSAASEKNKEEMRGIEAMARPDS
SPHGPVVPPGEAPEAITQAVASLPPEQMFELMKQMKICIQNNPEEARQMLLQNPQLAYAL
LQAQVVMKIVDPVIAQSILHKPNEAAAPIQPGGPQPQQQPSGPQGPLGPGPFPSTGPDMG
RRPPPHEMRGPHDQWGPGPDQRGGPDMRGHGMPPDIHDRGGPNHRDFHGPPDGPPPHGRG
MPPHERGPDFRGHPDRGFENRDMRGFDPRDPRSREPPRMEPRDERRGPPMDHRDMRDPRG
GPPPPEQRYGGPGGPRDPRDPRSDRGPPDRFHKGPQHSPQQQWGPPQGGPPRGPNGPGPS
GPPGNIRPPGPGGPPVSSAPNVPASGPDISAQDQEKAALIMQVLSLTDQQIALLPEEQRQ
SIMMLKEQIGRS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccttgcttgataatcagcaaaaacagtcgacgaatctattcgccgcagat
agatctctacgatcggttttcgttggaaatatcccctatgaagcrtccgaagagcagctt
aaagaaatattttctgaagttggtccagttgttagtttcaggctagtatttgatcgtgaa
actgggaaaccaaagggytatggattttgtgaatacaaagatcaagagacagctctcagt
gccatgcgtaacctaaatggctatgaacttaatggcagggctcttagagttgacagtgct
gcgtcagaaaagaacaaagaagagatgagaggtatagaagcaatggcacgtccagacagc
agtccccatggaccagttgttccrccwggagaagctcctgaggctataacacaagctgtg
gcaagtttaccgcctgagcaaatgtttgaacttatgaaacaaatgaagatttgcattcaa
aacaatccagaggaagcaagacagatgttgctgcagaatcctcagctagcatatgcttta
ttacaggcccaggttgtcatgaagattgttgatccagttattgcacagagcatccttcat
aagccaaatgaagctgcggctccaattcagccaggtggtcctcagccccaacaacagcca
tcaggaccccagggacccctggggccaggaccattcccttcaacaggacctgatatgggt
agacggccaccacctcatgaaatgagaggaccacatgaccaatggggaccaggtccagat
cagagaggtggccctgatatgcgagggcatgggatgccgcctgacatacatgacagaggt
ggtccaaatcacagagactttcatgggcctcctgatggacctccaccccatgggcgtggc
atgcctccacatgaaaggggtcctgatttyagaggtcatcctgacagagggtttgaaaat
agagatatgagagggtttgatccaagggatccaagatcacgagaaccaccaagaatggaa
ccacgagacgaaaggagaggtcccccaatggatcatagggacatgcgtgacccaagaggt
ggcccwccaccyccagagcagcgatatggaggccctgggggaccaagagatcctcgtgat
ccaagatctgacagaggcccacctgaccgattccacaaaggtccacaacattcaccwcag
caacartggggaccaccccaaggaggaccacccaggggaccaaatggccctggacctagt
gggccccctggaaatattcgaccccctgggcctgggggacctccagtatctagtgcccca
aatgttccagcgtctggaccagayatatctgcacaagatcaagagaaggctgctctcatc
atgcaagttctaagtttaaccgaccaacagattgcacttctaccagaagarcaacgtcaa
agtattatgatgttaaaggaacaaataggacggtcataa
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integrated database retrieval system
