Exaiptasia diaphana (Aiptasia): 110248488
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Entry
110248488 CDS
T05080
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03013
Nucleocytoplasmic transport
epa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110248488
09122 Translation
03013 Nucleocytoplasmic transport
110248488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epa03019
]
110248488
03041 Spliceosome [BR:
epa03041
]
110248488
Messenger RNA biogenesis [BR:
epa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110248488
Spliceosome [BR:
epa03041
]
Complex C
Other components
EJC/TREX
110248488
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110248488
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
110248488
NCBI-ProteinID:
XP_028517930
UniProt:
A0A913YQZ5
LinkDB
All DBs
Position
Unknown
AA seq
1585 aa
AA seq
DB search
MADVVVPTSLIKNWDKTGKDEFKRLCKNCSKDRDGRMSDSSFLCGSTDLKRVLYELLWHV
VKGDLKQDDALVVLAETKELHPTSLSVMADLICIMDVENQCLEDKVYRDRFLSLVAASVS
VIPEVLLKERLDLETLEALGLIQSQKTFNQKYVKTKTKLFYKQQKYNLLREESEGYAKLI
VELAQDIGGRITDATVLQNIKSLIGQFHLDPNRTLDIILECFECNLNKEPFFLPLLKSYM
GRSGTSSLFQILGFKFQFYKDQPGVTTPSSLYHLAAVLIKHGLIELDDLYLHLSPTDADI
AVSCKKMMSEMKQDAKKLNITILAEMTNNNEEGKENNAKEKENEKTEIPPDNQKFGLCEA
LIMVGAWKSAKMIMDKLPSYATVTNPSISGALCKLLHSTIEPLYRKHASKAARGRPYTTV
SGAPKQVQSYTDLIQDVFPMFNQLGPYLSCDPILMAKILRIGKGFLKEYPTVFDDKPNSP
TSPEIQNVWCGFLTLMDEVLLPSISLLECNSSLAEELWGMIKCYPYQVRYRLYGQWKNDS
YDKYMALVRVKAETIKKARYITKRLTKENVKPSGRQIGKISHSNPGVVFEYLLTQIQKYD
NFIGPVVDSLKYLTQLAYDVLAFCIIEALANPEKERLKLEDTNISDWLKSLAVFCGTVFK
KYPIELTCLLQYVTNQLKAGKSFDLLVLKEVVQKMSGLEISEEVTMSQLEALCGGELLKA
EGGYFGQIRNTKKSSQRLRDAVVDGELALPLCILMAQQRNGVVFFEDNKRHLKLVGKLYD
QCQDTLVQFGGFLASQMTADEYENHLPSLKDLGQKYHLTPEVAFYLSRPMFQHQIELKFE
SSKASVKSDKALSQKVIYQHYTDAVNNVMEPIVQSARLLQTAKVWNNISPQLYVTFWTLS
MYDVHVPVERYEAEIQRFKAQIIQLEDNKEMAASKKKKDKERWVQLIDKLKSEQREQEEH
NQCVMTWLKHERDSWFPSKSTKSETITQFLQLCMFPRCVYTASDAIYCAKFVHTLHNLKT
PNFSTLLCFDRVFSDISYTVASCTENEASRYGRFLCSMLEIVMRWHGDKKIYEKECGSYP
GFVTVLRATNTDKADHLDYENFRHVCHKWQYKLTKALVVCLESKDYTQIRNTIMVLTKIL
PFYPKVLNLGQALERRIDKICEEEKEKRQDIYTLAMGYSGQLKSKKKEMVAESDFHRKEK
PAPPPTTTTSNNDSSAVTVKQEKTDNQATSNSTSDTKVTVKTEPADSTTTAKPKATVSVK
KETENKKSSSPSVVKTENSSSQEKSKTTSSKSGTSTPTPRRNSNDSPSRTPVSNSTTAKS
GSGSSATKNQSKSKTPTSGSSVSKVDLTSSSDSDGKKAESGKTKSKDKEKERKEEKDSNE
KNKEKEKPKEKSKEKDKERSKSKEKDKDKVKEKAKDKPRTKHNTSIEAEEKEPKRRKIEG
SSSPYVQQDSTDSSLDKDQERSSSEREKDKEKTKDKERKRISSDQLDGKEVKRRREDNGE
VRSPSADSTKTKGKSDDGTHKEKSKLSVKLVRKVTSESTTKQDKEEKESKTITKKKEVND
KVEKESKDEDTAKSRRHHRSSSRRT
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtagtggttccaacgagtcttatcaaaaactgggataaaactggcaaagat
gaattcaaaagactctgtaaaaactgttccaaggatcgagatggaaggatgtcagattcg
agttttttgtgcggttctactgayttgaaaagagtgctttatgaactactttggcacgtt
gtcaaaggagacttgaaacaggacgatgccttggtagttctagctgagacgaaggagctg
catccaacaagtctttcagtgatggcggatctaatttgcataatggatgtagagaaccag
tgcctggaagacaaggtgtacagggatcgtttcctctcattagtggctgcatcagtgtct
gtaatccctgaggtgttgctgaaagagaggcttgatttggagaccttggaggcccttgga
ctcatccagtcacagaagacattcaaccagaaatatgtcaagacaaagacaaaacttttc
tataagcagcaraagtacaacttgctaagagaggaaagcgaaggatatgctaaactcatc
gtggagttggctcaagatattggaggtcgaataactgatgctacagtcttrcaaaatatc
aaatcactcattggtcagttccacctagatcccaacagaacgcttgacattatactagag
tgttttgaatgtaatctcaayaaggagccatttttcctaccacttctcaagtcatacatg
ggtagaagtgggacgtcatcwttattccaaatactaggctttaaatttcagttttacaag
gaccagccaggtgtcactactcctagttctctttatcatctggcagctgtgcttatcaaa
catggattgatcgaattggatgacctatatctgcatctgtcaccaacagatgcagatatt
gccgtgtcctgtaaaaagatgatgtctgagatgaaacaagatgcaaaaaaattaaatata
actatcttagctgaaatgactaataataatgaagaaggcaaagaaaacaatgcaaaggaa
aaagaaaatgaaaaaacagaaataccaccagataatcaaaagtttggtttgtgtgaggca
ctaattatggttggtgcgtggaaaagcgccaagatgatcatggacaaactgcctagttat
gctacagtaacaaacccttcaatatcaggcgcattatgtaaactactgcactctaccatt
gaaccactttatagaaaacatgcatccaaagctgctcgaggcagaccgtacaccactgtg
tcgggagcccccaaacaagtccagtcatacactgatttaatacaagatgtgttccctatg
ttcaaccaacttggtccttacttatcatgtgatcctatactgatggctaaaatcctccgt
attgggaagggatttcttaaagagtatccaactgtgtttgatgacaagcccaacagtcca
acatctcctgagattcaaaatgtctggtgtggttttcttactcttatggatgaagttctt
cttccctcgatttcacttcttgaatgtaactcaagtttagcagaagagctatggggaatg
atcaaatgctatccatatcaagttaggtatagactgtatggccagtggaagaatgattcg
tatgacaagtatatggcactggtcagggtcaaggctgaaaccatcaaaaaagcaagatat
attactaaacgtctcaccaaggaaaatgtaaaaccctctggccgtcagataggcaaaata
agtcacagcaatccaggagtagtctttgaataccttttaactcagattcagaagtatgat
aactttattggtcctgttgttgattctcttaagtaccttacacagttggcttacgatgtc
ttagctttctgtattattgaagctcttgctaatcctgagaaagagagactaaagctggaa
gatacgaacatatcagattggctaaaaagtttagcagtgttttgtggcacggtgttcaag
aagtatcccattgaattaacctgtcttcttcaatatgtcaccaaccagctgaaagctgga
aaaagttttgacttactggttttaaaagaagttgtccagaaaatgtctggcttagaaatc
tctgaggaggtcaccatgtctcaactggaagctttgtgtggtggagagctcctcaaagct
gagggtggctactttggtcaaataagaaacaccaagaagtcttcccagagactccgagat
gccgtggttgatggagagctggctctaccattgtgtattttaatggcgcagcagagaaat
ggtgtggttttctttgaagataacaaacgacatctcaagcttgtgggaaaactttatgat
cagtgccaagatacattagttcagtttggtggttttttggcaagtcaaatgacagctgat
gagtacgagaaccacttaccttctttaaaagatcttggacaaaagtaccatctgactccc
gaagttgcattttatctgtcaagacccatgttccaacatcaaattgagttgaagtttgaa
tcatcaaaggcgtctgttaaaagtgacaaagctttgtcccaaaaggtaatctaccaacat
tacaccgatgcagttaacaatgtaatggagcccattgtacagagtgcaagactactacag
actgctaaagtgtggaataatatcagtccacagttgtatgtaacattctggacgctgtcc
atgtacgatgtgcatgttcctgtggagagatatgaagctgagattcaaaggtttaaagca
caaataattcaattagaagataataaagaaatggcggcaagcaagaagaaaaaagacaaa
gagaggtgggtgcagttgattgacaagctgaaaagtgagcagcgagaacaggaagaacac
aatcaatgtgtgatgacttggttgaagcatgaacgggattcttggtttccctcaaaatct
accaagagtgaaaccatcacccaattccttcagctgtgcatgtttcctcgctgtgtctat
actgcaagtgatgctatctactgtgctaagtttgtgcacactttacacaacctgaagaca
ccaaacttttcaactctattatgctttgatagggtattttcagacatttcatatacagtt
gctagctgtactgagaatgaagcaagtagatatggtcgyttcctttgttctatgcttgaa
attgtgatgcgttggcatggagacaagaagatttacgaaaaggagtgtggtagctatcct
ggttttgtgactgtactgagagccaccaacacggacaaagctgaccatcttgactatgag
aactttagacatgtctgtcataaatggcaatataaactcaccaaggcattagtmgtttgc
ttggagtctaaggattatacacagatwagaaataccatcatggtgttgacaaagattctg
cccttctaccctaaagttctaaaccttggacaagccttagaaagacgcattgataaaatc
tgcgaagaagagaaagagaagagacaagacatctatactttagcaatgggatattctggt
cagcttaaatccaagaaaaaagaaatggtcgctgagagtgacttccatagaaaagaaaag
ccagctccaccaccgaccactacaacatccaacaacgacagcagcgctgtaactgtcaag
caagaaaaaacagataatcaagctacatccaattcgacttctgacacaaaagtaacagtg
aaractgaaccagcagacagtaccaccacagcaaagccaaaggccacagtatcagttaaa
aaagaaacagaaaacaagaagtcttcaagtcctagtgtagtgaaaacagagaattcctct
tcacaagaaaagtccaaaactacctcatccaagtctggaacatcgactccaacaccacga
agaaactcaaatgactcgcccagcaggactcctgtatctaactcaactactgcaaagtct
ggtagcggtagttcggcgacaaagaatcaatcgaagtccaagacaccaaccagtggttca
tctgttagtaaagttgacttgacgagcagcagtgattcggatggtaaaaaggcagaatcg
ggaaaaactaaaagcaaagacaaggaaaaagaacgaaaagaggaaaaagactcaaatgaa
aaaaacaaggagaaagagaaaccgaaagaaaaatccaaggaaaaagataaagaaagaagt
aaaagtaaagaaaaagataaagataaagtcaaagaaaaagctaaagacaagcctcgtact
aaacacaacacatcgatagaagctgaagagaaagagcccaaaagacgtaaaattgaaggc
tcgtcttctccttatgtacagcaggattccaccgatagcagtctagacaaggaccaagaa
cgatcgagttctgaacgagaaaaagacaaagaaaaaactaaagacaaagaaagaaaaagg
atatctagcgatcagttagacggaaaagaagtcaaacgacgaagggaggataacggggaa
gttcgatcgcccagcgcggattccacaaagacgaaaggaaagtctgacgacggtacccat
aaggaaaaatccaagttatcggtgaaacttgttcgcaaagtaaccagtgaatcaacaacc
aaacaagataaagaagaaaaagaatcgaaaaccattaccaaaaagaaagaagttaacgac
aaagttgaaaaggaatcgaaagacgaagataccgcgaaatcamggagacatcatagatca
tcatcgagaagaacttga
DBGET
integrated database retrieval system