KEGG   Exaiptasia diaphana (Aiptasia): 110249970
Entry
110249970         CDS       T05080                                 
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
epa  Exaiptasia diaphana (Aiptasia)
Pathway
epa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:epa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    110249970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:epa03400]
    110249970
DNA repair and recombination proteins [BR:epa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     110249970
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27 PAH_ZNF598
Other DBs
NCBI-GeneID: 110249970
NCBI-ProteinID: XP_020912217
UniProt: A0A913XYD7
LinkDB
Position
Unknown
AA seq 925 aa
MALQPCQQISLDSPAEHGFLAFLRSLPEKLDTTFRVFDRSEYYTVHGSDALFAAKEVFKT
NSVIKYLGGDKKVPSVALSKMNFESLLRDLLLVRQYRVELYRNKGGKTNNSWEVIAKASP
GNLHQFEELLFGNAEMSTSAVVMAIKLGSDNGQRIVGAAYADSASRKLGVSQFTDDDQFS
NLEALLVQLGPKECLLVQNDANSDSSTMQEIIRRSNILITERKKADFSNKDIVQDLNRLL
KLGASGNSAALPEMDLTYATSSLASLIKYLELLSDETNFGQFLLESFDLSQFMKLDAAAV
RALNLFPNPMDGGNKTMCLLGLLNKCKTAQGQRLLSQWIKQPLMDKNKIEDRLNVVEKFT
EDTEMRQVLQDELKKFPDFSRLSKKFQRQKATLQDCVKVYQTVVNLPSLVDTLEKCQGTH
VKLIDEWFKTPIKDLLEDFSKFSELVETTIDLEQVENHEYLIKASFDEGLQECKEQMDEI
LEKIPIELNKAGRDLGLEPSKTIKLESNNQIGYFFRVTRKEEKGLRNNKKYITIETRKDG
IRFTNSSLKQLNEEFQGYRTMYNDVQSKLATEVLRVAGGYSEPMQTISDVIAQLDVLVSF
AHVSANAPIPYVRPTLSPQGEGDIKLDSSRHPCLEMQDDVSFIANNVDLTHDEKMFLIIT
GPNMGGKSTYIRQIGVVVLMSQIGCFVPCTSAHISLVDCILARVGSGDSQQKGVSTFMSE
MLETASILKSATKDSLIIIDELGRGTSTYDGFGLAWAISEFIATKIKCYCLFATHFHELT
ALADVVPTVTNLHVTAMTTGGTLTLLYKVMSGVCDQSFGIHVAELAHFPQNVIEMAKEKA
AELEDFQGNTADLGQGVIDQSGCSPSKRRRLVKQDGEKIIKDFLSQVKSLPLDQLTDEQI
MTEVDKLKQNVQAQDNPYVQELLAK
NT seq 2778 nt   +upstreamnt  +downstreamnt
atggcattacagccttgtcaacaaatctctttagatagtcccgctgagcatgggtttctc
gccttcctgcggtccttgccggagaagttggacacaacatttcgagtattcgatcgatcg
gaatactacacagtgcacgggagtgatgcattgtttgcagctaaagaagtttttaaaaca
aacagcgtcatcaaatacttgggaggagataagaaagtgccttctgtggctttaagcaaa
atgaattttgagtctttgttgcgagatctacttcttgtgaggcaatatcgagtggagcta
tacagaaataaaggtggaaaaactaacaattcatgggaagtgattgctaaggcatctcct
ggaaatctacatcagtttgaagaactgttatttggtaacgcagagatgtcaacatctgct
gttgtcatggcaattaaacttggttcagacaatggccagagaattgttggagctgcatat
gccgacagtgcatcaaggaaacttggagtttctcagtttacagatgatgaccagttttca
aatctagaggcattgcttgtccaacttggtccaaaagaatgtcttcttgtgcaaaacgat
gcaaattctgattcatccacgatgcaagaaattattcgccgctcaaacatactcatcacc
gagcgcaagaaagctgacttttccaacaaagacattgtacaagatctgaatcgacttttg
aaacttggtgcatcaggaaacagtgcagctcttcctgagatggacttgacttatgccaca
tcgtctcttgcttcattgattaagtatcttgagttactttctgatgaaacaaactttgga
cagtttctcctggagtcatttgatctcagtcagttcatgaaacttgatgctgccgctgta
cgagcattgaacctttttcctaatccaatggatggaggtaataaaacaatgtgtcttctt
ggtcttcttaataaatgtaaaactgctcaaggacaacgtttattatcacagtggatcaag
caacctttgatggacaagaacaaaattgaagacagactgaatgtagtagaaaagttcaca
gaagatacagagatgagacaagttcttcaggatgaactcaagaagtttcctgacttttct
cgtctctccaagaaatttcaacgtcagaaggcaacattgcaggattgtgtcaaagtctat
caaactgttgtaaatcttccatctctggttgatactctagaaaaatgccaaggcacacat
gttaaacttattgatgaatggtttaagacaccaattaaggatcttctggaggattttagt
aagttcagcgagcttgttgagacaactattgacttggagcaagttgaaaatcatgagtat
ttgatcaaagcttcatttgatgaaggtttgcaagaatgtaaagaacagatggatgaaatt
cttgaaaagattcccatagagttaaataaggctggcagagaccttggtttagaaccaagc
aagacaattaaacttgagtcaaacaatcaaattggatatttctttagagttactagaaag
gaggagaaaggacttcgtaataataagaaatacattacaatagaaacaagaaaagatggc
attaggttcactaattcatctcttaaacaacttaacgaagagtttcaaggttatcgtact
atgtataacgatgtccagagcaaacttgctactgaagtcttgagagttgcaggtggatat
agtgagccaatgcagaccattagtgatgtaatagcacagttagatgtgctagtcagtttt
gcccatgtttcagccaatgcacccattccttatgtacgtccgacattgtcacctcaaggt
gaaggagatatcaagctggattcatcacggcatccctgtcttgaaatgcaagatgatgtt
tcatttattgctaataatgttgacttaacacatgatgaaaagatgtttctgatcatcaca
gggcccaacatgggtggtaaatcaacgtatatacgacagataggtgtggtagtgttgatg
tctcagattggatgctttgtaccctgcacctcggcgcacatttccttggttgactgcata
ctggcacgtgtggggtctggagacagtcaacaaaagggtgtgtcgacttttatgtcagaa
atgctggagacagcatcaattttgaaatcggcaacaaaggattcattgatcatcattgat
gagctgggtagaggaacatcaacctatgatggttttggccttgcctgggcaatctctgaa
ttcattgcaacaaagataaagtgttattgtttatttgcaacacacttccatgaactaacg
gctctggcagatgttgttcctactgtaaccaacttacatgtaacagcgatgacgacgggt
ggaactttaacattattatataaagtaatgtctggtgtttgtgatcagagttttggtatc
catgtagcagagttagctcactttccacaaaatgtaattgagatggccaaagaaaaagct
gctgagctggaagactttcagggtaacacagctgatcttggacagggagtcatagaccaa
tcaggatgttccccttctaaaaggcgaagactggtcaaacaggatggagaaaagataatt
aaggattttctaagtcaagttaagagtttacctcttgaccagttaacagatgaacaaata
atgacagaagttgataaactaaaacaaaatgttcaagctcaagacaacccttatgtacaa
gaacttcttgcgaaataa

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