Exaiptasia diaphana (Aiptasia): 110251946
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Entry
110251946 CDS
T05080
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
epa
Exaiptasia diaphana (Aiptasia)
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
epa03041
]
110251946
Enzymes [BR:
epa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110251946
Spliceosome [BR:
epa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110251946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
HA2_C
Helicase_C
Ank_2
HA2_N
Ank
Ank_5
Ank_4
DEAD
Ank_3
DUF505
Motif
Other DBs
NCBI-GeneID:
110251946
NCBI-ProteinID:
XP_020914353
UniProt:
A0A913Y408
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MSQPCRIVCTQPRRISAISVAERVAVERGEKIAQTVGYQIRLESRVSPKTVLTYCTSGVL
LRTLMQADDSLSYVTHVIVDEIHERBRFADFLLITLREILAVNKKIKLILMSAALDVNLF
IEYFGNCPVVHVPGRCFEVKEIFLEDILGLTGYQNKGMKKHFKGDDKVRVLLDKSAKHIE
RLRIASSKTEEEKENDEKTKLDETEREAASTFPTQDNDQVDIEDVLPEDVGILLPEDDDI
IBDGDEDINTDNATDDVTDDITDDTTDDNSNDVNGDDDISNSGYDGNDEGDDIIIDDDDD
DDGDDESEGKNLAKETEAVNIXPKXEDSTNQTEDDEDEEDSYLRKEMDESISDAWLNGSE
DSFVQILHLIMNENISVDYQHSETQVTALMVAAGRGCTGVVEQLILLGANPNVKDPKNNW
TALDWAKKWEQSEVIEMLEAYIASPQTYCEDISLEKQSTELSDEAKELLEVYHKTFDDDR
VDLELILSLLNYICSLGKQGAVLXFLPGYDEIITLRDKLIANNSXFCNCFIRXQLXTLHS
CMQPAEQRKVFRKLPSNIRKIILSTNIAETSVTIDDVVFVIDSGKVKEKSFDALTSVSTL
HPVWISKASAIQRKGRAGRCSPGVCFHMFSHVRYESFQEYQVPEMLRTPLQELCLHTKLL
SGPNTSIAEFLAKAPEPPAYLILRNAVTFLKTIDALDNWEDLTDLGHHLADLPVEPRLGK
MILYSVILKCIDPVITIACALAYRDPFILPMYAGEKRLAALAKKRFIIDSFSDHLLFVKA
FRGWQRAKAEGYDKSYCQRNYLSPATLEMMSGMRSQMIGHLKSCGFIRPRGAGDMRDLNT
NSNNWAVVKXALCAGMYPNIVRIDRENHKLTTPKESKVRLHTSSIIYQQPEKQESMVNAQ
VKAVKKIPSDWLIYEEMTRMYTSVSIKCCTAVSPITISLFTGPSLSSPNLESGSKSRDQD
RRNSEGRVNSESSDSENEESKPGESRDNHVEMKVDDWISLSGNDETIHLTTYLRHKLQAL
FIRRIRSPSRPWSQVDEAIVRATVAVLSAEEEVINPNLYPKQRKPRQDYSSESRPRDDRP
RDRFSSPRDRLRDSPAPSWRTRQTNSPIPQASQRRTIESTSQPRSQAQLSDSEARYFIIK
CNNQRNLSISMAKGIWATTIANEKKLNRAFRECKKIVLIFSVQGSGHFQGFAHMASPIGK
DKSPEFGSSSLGGVFKVDWIKKANIPFQEAHHLVNPWNDHKKVQISRDGQELEPTVGADL
CKLWDAPVATPSQYSRPPLGSNRRGQRQIATQQDPNQWQQSPSPSPLTTNPXVYPPHXAS
LPIPVPVPAQHSHGTVMHRFPXQVMAGXQQPPIGYTAHPVPSMHTTNLGAVRYPGNVAGL
QFQQPPTPTGTAILRPNSYPS
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaccatgtcgtattgtgtgcacccaaccaagaagaatttctgcaatatctgtt
gctgaaagagttgcagtagaacgaggagagaaaattgctcagacagtgggctatcaaatt
agactggaaagcagagtgtctccaaagacagtacttacttactgtaccagtggggtcttg
ttgagaaccctgatgcaagctgatgattctctgtcctatgttactcatgtcattgtagat
gaaattcatgagaggratagatttgcagactttcttctgatcacattgcgtgaaattcta
gctgtcaacaagaaaatcaaactcattctgatgagtgctgctttggatgtcaacttgttc
attgaatactttggcaattgtccagtagttcatgttcctggtagatgttttgaagtgaag
gaaatattccttgaagacattcttggcttaacggggtaccagaacaaaggaatgaaaaag
catttcaaaggagacgataaagttcgtgttctgttggacaaaagtgcaaagcatattgaa
agactaagaattgcatcatcaaagactgaagaggaaaaggaaaatgatgagaaaactaaa
ttagatgaaacagagagggaggctgcatccacttttcctacacaggacaatgatcaagtt
gacattgaagacgttctcccagaagatgttggcattctactcccagaggatgatgacatc
attratgatggtgatgaggacattaacactgacaacgcaactgatgatgtcactgatgat
atcactgatgataccactgatgacaacagtaatgatgtcaatggcgacgatgacatttcc
aatagtggttatgatggaaatgatgagggtgatgatatcatcattgatgatgatgacgat
gatgatggtgatgatgagtctgagggcaagaatcttgcaaaggaaactgaggctgtcaac
attgrcccaaagyctgaagattctacaaatcaaactgaggatgacgaagatgaagaagat
tcataccttagaaaagagatggatgaaagcatctcagatgcatggctcaatgggagtgaa
gattcytttgtacagattcttcatttgattatgaatgaaaacattagtgtggactaccaa
cattcagaaacacaggtgacagcactwatggtkgctgctggtcgtggctgcacaggagtt
gtggaacagcttattctactgggagcaaatccaaatgtcaaagatccaaaaaataactgg
acagcactggattgggccaaaaagtgggagcaatcagaagtcattgaaatgcttgaagcc
tatattgcatcacctcagacatactgtgaagatatctcactagagaaacaatcaacagag
ttaagtgatgaagcaaaggaactacttgaagtttatcacaagacattcgatgatgacaga
gttgatctggagctaattctgagccttttgaattatatttgttcccttggaaaacaaggc
gctgtattartatttctaccaggatatgatgaaataataactttaagagataaacttatt
gctaacaattcawgtttttgtaattgtttcatcagatwtcagttgytcactcttcattca
tgtatgcagccagctgagcaaaggaaggtgtttagaaagttaccatccaatatccgtaaa
attatattgtcaacaaacatagctgaaactagtgtcactatagatgacgtagtgtttgtt
attgactctggcaaagttaaagagaaatcatttgatgccctaacatcagtatctacattg
catcctgtttggatatcaaaagccagtgcaatacagagaaagggaagggctggtcgttgt
tcccccggtgtatgttttcatatgttcagtcatgtacgytatgaaagcttccaggaatat
caagtacctgaaatgctacgcactcccctacaggaactttgtytacataccaagctactg
tcaggtccaaacacttctatagctgaattcctggccaaagcaccagaaccaccagcctat
ttgatactgcgcaatgctgtcacttttctaaagactatagacgctcttgacaactgggaa
gatttgactgacttaggtcatcatctagcagatttaccagtggaacctcggcttggtaaa
atgattctatactcagtgatactgaartgcattgatcctgttattactatcgcttgtgca
ttggcatatagagatcctttcattcttccaatgtatgccggagagaagcgtttagcagct
ttagccaagaagaggtttataattgactcctttagcgaccatcttctgtttgtaaaagct
ttcaggggctggcagcgagctaaagctgaaggttacgataaaagttattgtcagagaaac
tacttgtcaccagcwacactagaaatgatgtcaggaatgaggtctcaaatgattggtcat
ctcaagtcttgtggttttataagaccgcgtggagctggtgatatgagagacctgaacacc
aattcyaacaactgggctgttgtcaagkctgccctgtgtgctgggatgtatcctaatata
gtacggattgatcgagagaatcataaattaactacaccgaaagagtcyaaggttaggctg
cacacatcttcaatcatataccagcagccagaaaaacaagagagcatggttaatgcgcag
gtgaaagcagtcaagaagatcccttctgattggttgatctacgaggaaatgacaagaatg
tacacctcagtttccatcaagtgctgtacagcggtctcgccaataaccatcagcttgttc
actggaccaagtctatcctcgccaaatctggagtctggttccaagtcacgtgatcaggac
agacggaacagtgaggggcgtgtcaatagtgaaagtagtgatagtgaaaatgaagagagt
aaacccggtgagtcacgtgacaaccatgtcgaaatgaaggtcgatgattggatatcgctg
tcgggaaatgacgagactattcatttaactacttatctgagacacaagcttcaagcgttg
tttatcagacggatacgatctccttctcgtccatggtcacaagtagacgaagccattgtt
agggcaactgtagcagtgctatcagctgaagaggaagtcatcaacccgaacttatacccc
aaacagagaaaacctagacaagattacagcagcgagtcaagaccccgagatgacaggccg
cgggatcgtttctcttccccgagggatcgtcttcgggattcacccgccccaagttggaga
acgagacaaacaaactcaccaatcccacaggcatctcaaaggaggactattgaatcgacg
tcacagcctcgatctcaggctcagctttctgatagtgaagctcgttacttcattatcaag
tgtaacaatcaacgaaacctcagcatatcgatggcaaagggtatctgggccacgacgatt
gcaaatgagaaaaaactgaaccgcgcatttagagaatgtaaaaagattgtgcttattttc
tctgtgcaaggaagtggtcattttcaaggttttgcgcacatggcttctcccattggaaaa
gacaagtcacccgagtttggttccagttccctaggcggagtattcaaggtcgattggata
aaaaaagcgaatattccattccaagaagcgcatcatttagtgaatccatggaacgaccac
aagaaagttcagatcagtcgagatggccaggaactagagcccaccgttggcgcagacctg
tgtaaattatgggatgcaccagttgctacaccttcgcaatactcaagaccmcccttagga
agcaataggcgtggccaacgtcaaatcgccacccaacaggacccaaaccaatggcaacag
tctccatcaccgtcgcccttgactacaaacccccasgtgtaccccccacatgytgcctct
ttgcctataccagtcccagtcccagcacaacattcccacggtacagtaatgcacaggttt
ccccawcaggtcatggcaggarttcaacagcctcccattgggtacaccgcccacccagtc
ccctctatgcatactacgaatttgggggcagtaaggtatcctgggaatgttgcrggattg
cagttccaacaaccgccgacaccaacggggacagcaatactacgacctaactcttatcct
tcgtag
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integrated database retrieval system
