KEGG   Exaiptasia diaphana (Aiptasia): 110252838
Entry
110252838         CDS       T05080                                 
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
epa  Exaiptasia diaphana (Aiptasia)
Pathway
epa03440  Homologous recombination
epa03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:epa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    110252838
   03450 Non-homologous end-joining
    110252838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:epa03032]
    110252838
   03400 DNA repair and recombination proteins [BR:epa03400]
    110252838
DNA replication proteins [BR:epa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    110252838
DNA repair and recombination proteins [BR:epa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     110252838
    BRCA1-C complex
     110252838
   NHEJ (non-homologous end-joining)
    MRX complex
     110252838
SSDB
Motif
Pfam: AAA_23 SMC_N AAA_15 AAA_21 Rad50_zn_hook SbcC_Walker_B AAA_13 AAA_29 KH_PARP14_1 ABC_tran
Other DBs
NCBI-GeneID: 110252838
NCBI-ProteinID: XP_020915351
UniProt: A0A913Y7G0
LinkDB
Position
Unknown
AA seq 1321 aa
MSSIEKLKITGIRSYSHADSAIIEFFKPLTLIVGANGAGKTSIIECLKYVTTGDMPPGSK
NSYFVHDPKVANEQEVKGQVKLMFTDTTQKTVVVTRTLVSQQKGKKVETRSLESVIKRDI
QGERRSLSSRCAEVNHEMITHLGVSKAVLENVIFCHQEESNWPLSEGKALKQKFDEIFAA
TRYIKALEAIRKLRLEQSKTVGLCEAELKYLKENKDKAQEIAEELEKREGKVEATKDSIL
KITSALQPVETRMVEIDSVIQEVNECTKEIELLMSKKDQFFSIGRELEDKINDVFTGSSE
ELQRIYNEFQNKIGEKHSLLHQNEQEHQRLVSKQQELTKEKSNILLEHGKLEQQAQRHKR
NVEDRDVMVVTLAGHYKVPRYDSAPLTDTKVDEFVEELRRKYTIIIEDTKQQKQKFKEQI
DAAQKKVDDIRRTQAEYGETIRLKRNLMRDNQSELKSIGQELSNVDASANRLKSLETELQ
RAEKDLKEAKEQGNVDDMNAEIEKLQNDKRQVDSELSRLREEQQTMHLQSTTQAKLDMLX
KEKTEKQDKIQKLMDKHEEDIKTYLGGTRTSESLTGKLKQYIKSKGKDLQETRNKIQRLK
QAQSAKNANKKNIEDLLERKQEQANTYKQQLKEACGDNDYNTLKEXVKTQIDDYRDDKSL
YASIESIYKKYIDKLQDDSVKKEGCPLCHRCFDSNKEIKALVSELSKKITSLPQKRADNE
SRLEREEMRYQKILNLGPVKDNLEKLESTEIQETKSRLAEISSDIEQTDMNITELEDVLS
LTESEEITVRQMEPDLREAESLKHGLLDLDRNISLYQSKLHGIAPGRTMQAVTNEINDRQ
DRSETLDRHIDRRRRALTQLQRTISTQESHLNELKSQKLELTQQLQKRTNLEGQKAELSA
RNDALEREIKEAESQARPIQEMLNQEENNKQEIVSAKEAMEDENRKMLTEIRTNGDKLRE
KISEIKRYIXEGNESALQDNEERLTNLENREVQLYQRKESVTQKIDTLKEDIAKQEIKAR
DLEDNINLKRTQQDIKDMEGKIHSAEAHLRQYGDQRSLNSERLTLQRQSHDMRKEKAQLE
GRQKGYEDEIKRFQSELRSNQYRNAEDKHREKVIEMKTTQMASVDLDKYYKALDRAIMKY
HGLKMAEINKIIKEYWINTYKGNDIDTIEIRSDEEEGSGASKARRTYNYRVVMIKGDTAL
DMRGRCSAGQKVLASLIIRLALAETFCLNCGIFTLDEPTTNLDEDNITSLADQLASVIRT
RHAQKNFQLIVITHDEGFVDILGRADFVDHYYRIYKDNEGNSRIAKNXVASLNHREESYL
S
NT seq 3966 nt   +upstreamnt  +downstreamnt
atgtcttccatcgaaaagttgaagattacgggaattcgcagctattctcatgcagattct
gctattattgagttctttaagccattgacwttaatagtaggtgcaaatggcgctggtaaa
acgtcaattatygagtgcctcaagtatgtcactactggtgatatgccaccgggaagtaag
aactcttactttgtacacgaccctaaggttgcaaatgaacaagaagtcaaaggacaagtt
aagttgatgtttacagacacaactcagaaaacagttgtagttacaagracattggtatca
cagcaaaagggtaaaaaagttgagacaagaagtttagaaagtgtaatcaagagagatatc
caaggagaaaggagaagtctaagttcaaggtgtgctgaagttaaccatgaaatgattaca
catcttggagtttctaaagctgttcttgagaatgtgattttttgtcatcaagaggaatct
aattggcctctcagcgaaggaaaggctttgaaacagaagtttgatgagatatttgctgcc
acaagatacatcaaagctttggaagccatacgcaagctcagactagaacagagcaaaaca
gttggattgtgtgaggcagaactcaagtacttgaaggaaaacaaggacaaagcacaggag
attgctgaagaactagaaaaacgagagggaaaagtagaagcaacmaaggattccatcttg
aaaataacaagtgcyttacaacctgttgaaacgcgtatggttgaaatagactctgtcatt
caagaggtcaatgagtgtacaaaagagatagaactgttgatgtctaaaaaggaccagttt
ttcagcataggacgagaacttgaggataagatcaatgatgtgtttactggttcatcagaa
gagctgcagaggatctacaatgaattccagaataagattggagaaaagcacagtctttta
catcagaatgaacaagaacaccagcgtctagtttcaaagcaacaagaacttactaaggaa
aaaagtaatatcttacttgaacatggcaagctggagcagcaagcacagaggcacaagaga
aatgtagaggaccgtgatgtcatggtggtcactttagctggccattacaaggttcccagg
tatgacagtgctccattgactgatacaaaagtagatgaatttgtagaagaactaagaaga
aaatacaccatcattattgaagacaccaaacaacaaaaacaaaagttcaaggaacaaata
gatgcagctcagaagaaagttgacgatatcaggagaacacaagctgagtatggagaaaca
ataagactgaagagaaatctgatgagagataatcagtcagagctcaagtcrattggtcaa
gaacttagtaatgtagatgcttcagcaaacagacttaagtcccttgaaacagagcttcaa
agagcagaaaaagacttgaaagaagccaaggaacaaggcaatgtggatgacatgaatgca
gaaatagaaaaactacagaatgataaacgtcaagttgacagtgaactcagtagaytaagg
gaagagcarcaaactatgcacttacagtcaaccacacaagcaaaactagacatgttrrtc
aaggaaaagacagaaaaacaagayaaaatacaaaaattaatggacaagcatgaagaagac
attaaaacatatcttggtggcactcgtaccagtgaaagtctaacaggaaaactaaagcag
tacatcaaatcaaaaggaaaagatctscaagaaacaagaaataaaattcaaagactgaaa
caggcacagtctgcaaagaatgccaacaagaaaaacattgaggatttactagaaagaaaa
caagaacaagccaacacatacaagcagcagttgaaggaggcttgtggtgacaatgactac
aatacactcaaagaaastgtcaagacmcaaatagatgactatagagatgacaagagtttg
tatgcatctattgaaagtatctataagaagtacattgataaactacaggatgactcagtc
aaaaaggaagggtgtccactttgtcatcgttgttttgattcaaacaaagaaattaaggct
ctggtctcagagctaagtaaaaaaatcactagtctccctcaaaagagagcagacaatgaa
agccgtttggaaagagaagagatgcgytaccagaagatcttgaaccttggaccagtcaaa
gacaatcttgagaagctagagtccacagagatacaagaaactaagagcagacttgctgaa
atctcatctgayattgaacaaacagacatgaacatcacagagcttgaagatgtsttaagt
ttgacagaaagtgaagaaataacagtgaggcagatggagcctgacttacgagaagctgaa
agtttgaaacacggactwttagacctagatagaaatatatctctgtatcagtccaaatta
catggaatagctccaggacgtacaatgcaggctgtaaccaatgaaatcaatgacagacaa
gatcgctcggaaacacttgaccgccatattgatcggcgtcggagagcacttacacaatta
cagagaaccatatcgacacaggaatcccacttgaatgaattgaaatcacaaaagttggag
ttaacacagcagttacagaaaagaactaatttagaaggacagaaagctgaattgagcgca
agaaatgatgctttggagcgagaaattaaggaagctgagtctcaagccagacctatccag
gaaatgcttaaccaagaagaaaacaacaagcaagagattgtctctgctaaggaggccatg
gaagatgaaaatagaaaaatgttaaccgaaataagaaccaatggagacaaactgagagaa
aagatcagtgaaataaagaggtacattartgaaggcaatgaatcagccttacaggacaac
gaagaaagactaactaatctagagaatagagaagtacaactttaccagagaaaagagtct
gtgacacaaaaaattgacacactcaaagargacatygcaaaacaagagatcaaagcacgt
gaccttgaagataacatcaatttaaagagaacccarcaagacattaaggayatggaagga
aagattcactcggctgaagctcatttaagacaatatggagaccagcgaagtctaaacagt
gaaagattgacactccaacgtcagtcccatgacatgcgcaaagagaaagcccaactagaa
ggaaggcaaaagggttatgaagatgaaataaaaagatttcaatctgaacttcgtagcaat
cagtayaggaatgcagaagacaaacacagagagaaagtaattgagatgaagactacccaa
atggcaagtgttgacctggacaagtactacaaagcattagacagggccattatgaagtat
catggtctcaagatggctgagatcaacaagattattaaagagtactggatcaacacctac
aagggaaatgatattgatactattgagataagatctgatgaagaggagggtagtggagca
agtaaagctagaagaacctacaattacagggtcgtcatgattaaaggagatactgcttta
gacatgagaggaagatgcagtgctggtcaaaaggttcttgcatcactaatcataagattg
gctttggctgaaaccttttgtttgaactgcggtatctttacattggacgaacctacgacy
aatttagacgaggataacatcacaagtcttgctgaccaattagcgagtgtgatacgcaca
aggcatgcgcaaaagaactttcagcttattgtcatcacacacgacgagggtttcgttgat
attcttggtcgtgctgactttgtcgaycattactacagaatatataaagataacgaagga
aattcaaggattgcaaaaaatarcgtcgcatcgttaaaccaccgagaagaatcctacctg
tcttga

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