Exaiptasia diaphana (Aiptasia): 110252838
Help
Entry
110252838 CDS
T05080
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03440
Homologous recombination
epa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110252838
03450 Non-homologous end-joining
110252838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
epa03032
]
110252838
03400 DNA repair and recombination proteins [BR:
epa03400
]
110252838
DNA replication proteins [BR:
epa03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
110252838
DNA repair and recombination proteins [BR:
epa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
110252838
BRCA1-C complex
110252838
NHEJ (non-homologous end-joining)
MRX complex
110252838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
Rad50_zn_hook
SbcC_Walker_B
AAA_13
AAA_29
KH_PARP14_1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
110252838
NCBI-ProteinID:
XP_020915351
UniProt:
A0A913Y7G0
LinkDB
All DBs
Position
Unknown
AA seq
1321 aa
AA seq
DB search
MSSIEKLKITGIRSYSHADSAIIEFFKPLTLIVGANGAGKTSIIECLKYVTTGDMPPGSK
NSYFVHDPKVANEQEVKGQVKLMFTDTTQKTVVVTRTLVSQQKGKKVETRSLESVIKRDI
QGERRSLSSRCAEVNHEMITHLGVSKAVLENVIFCHQEESNWPLSEGKALKQKFDEIFAA
TRYIKALEAIRKLRLEQSKTVGLCEAELKYLKENKDKAQEIAEELEKREGKVEATKDSIL
KITSALQPVETRMVEIDSVIQEVNECTKEIELLMSKKDQFFSIGRELEDKINDVFTGSSE
ELQRIYNEFQNKIGEKHSLLHQNEQEHQRLVSKQQELTKEKSNILLEHGKLEQQAQRHKR
NVEDRDVMVVTLAGHYKVPRYDSAPLTDTKVDEFVEELRRKYTIIIEDTKQQKQKFKEQI
DAAQKKVDDIRRTQAEYGETIRLKRNLMRDNQSELKSIGQELSNVDASANRLKSLETELQ
RAEKDLKEAKEQGNVDDMNAEIEKLQNDKRQVDSELSRLREEQQTMHLQSTTQAKLDMLX
KEKTEKQDKIQKLMDKHEEDIKTYLGGTRTSESLTGKLKQYIKSKGKDLQETRNKIQRLK
QAQSAKNANKKNIEDLLERKQEQANTYKQQLKEACGDNDYNTLKEXVKTQIDDYRDDKSL
YASIESIYKKYIDKLQDDSVKKEGCPLCHRCFDSNKEIKALVSELSKKITSLPQKRADNE
SRLEREEMRYQKILNLGPVKDNLEKLESTEIQETKSRLAEISSDIEQTDMNITELEDVLS
LTESEEITVRQMEPDLREAESLKHGLLDLDRNISLYQSKLHGIAPGRTMQAVTNEINDRQ
DRSETLDRHIDRRRRALTQLQRTISTQESHLNELKSQKLELTQQLQKRTNLEGQKAELSA
RNDALEREIKEAESQARPIQEMLNQEENNKQEIVSAKEAMEDENRKMLTEIRTNGDKLRE
KISEIKRYIXEGNESALQDNEERLTNLENREVQLYQRKESVTQKIDTLKEDIAKQEIKAR
DLEDNINLKRTQQDIKDMEGKIHSAEAHLRQYGDQRSLNSERLTLQRQSHDMRKEKAQLE
GRQKGYEDEIKRFQSELRSNQYRNAEDKHREKVIEMKTTQMASVDLDKYYKALDRAIMKY
HGLKMAEINKIIKEYWINTYKGNDIDTIEIRSDEEEGSGASKARRTYNYRVVMIKGDTAL
DMRGRCSAGQKVLASLIIRLALAETFCLNCGIFTLDEPTTNLDEDNITSLADQLASVIRT
RHAQKNFQLIVITHDEGFVDILGRADFVDHYYRIYKDNEGNSRIAKNXVASLNHREESYL
S
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccatcgaaaagttgaagattacgggaattcgcagctattctcatgcagattct
gctattattgagttctttaagccattgacwttaatagtaggtgcaaatggcgctggtaaa
acgtcaattatygagtgcctcaagtatgtcactactggtgatatgccaccgggaagtaag
aactcttactttgtacacgaccctaaggttgcaaatgaacaagaagtcaaaggacaagtt
aagttgatgtttacagacacaactcagaaaacagttgtagttacaagracattggtatca
cagcaaaagggtaaaaaagttgagacaagaagtttagaaagtgtaatcaagagagatatc
caaggagaaaggagaagtctaagttcaaggtgtgctgaagttaaccatgaaatgattaca
catcttggagtttctaaagctgttcttgagaatgtgattttttgtcatcaagaggaatct
aattggcctctcagcgaaggaaaggctttgaaacagaagtttgatgagatatttgctgcc
acaagatacatcaaagctttggaagccatacgcaagctcagactagaacagagcaaaaca
gttggattgtgtgaggcagaactcaagtacttgaaggaaaacaaggacaaagcacaggag
attgctgaagaactagaaaaacgagagggaaaagtagaagcaacmaaggattccatcttg
aaaataacaagtgcyttacaacctgttgaaacgcgtatggttgaaatagactctgtcatt
caagaggtcaatgagtgtacaaaagagatagaactgttgatgtctaaaaaggaccagttt
ttcagcataggacgagaacttgaggataagatcaatgatgtgtttactggttcatcagaa
gagctgcagaggatctacaatgaattccagaataagattggagaaaagcacagtctttta
catcagaatgaacaagaacaccagcgtctagtttcaaagcaacaagaacttactaaggaa
aaaagtaatatcttacttgaacatggcaagctggagcagcaagcacagaggcacaagaga
aatgtagaggaccgtgatgtcatggtggtcactttagctggccattacaaggttcccagg
tatgacagtgctccattgactgatacaaaagtagatgaatttgtagaagaactaagaaga
aaatacaccatcattattgaagacaccaaacaacaaaaacaaaagttcaaggaacaaata
gatgcagctcagaagaaagttgacgatatcaggagaacacaagctgagtatggagaaaca
ataagactgaagagaaatctgatgagagataatcagtcagagctcaagtcrattggtcaa
gaacttagtaatgtagatgcttcagcaaacagacttaagtcccttgaaacagagcttcaa
agagcagaaaaagacttgaaagaagccaaggaacaaggcaatgtggatgacatgaatgca
gaaatagaaaaactacagaatgataaacgtcaagttgacagtgaactcagtagaytaagg
gaagagcarcaaactatgcacttacagtcaaccacacaagcaaaactagacatgttrrtc
aaggaaaagacagaaaaacaagayaaaatacaaaaattaatggacaagcatgaagaagac
attaaaacatatcttggtggcactcgtaccagtgaaagtctaacaggaaaactaaagcag
tacatcaaatcaaaaggaaaagatctscaagaaacaagaaataaaattcaaagactgaaa
caggcacagtctgcaaagaatgccaacaagaaaaacattgaggatttactagaaagaaaa
caagaacaagccaacacatacaagcagcagttgaaggaggcttgtggtgacaatgactac
aatacactcaaagaaastgtcaagacmcaaatagatgactatagagatgacaagagtttg
tatgcatctattgaaagtatctataagaagtacattgataaactacaggatgactcagtc
aaaaaggaagggtgtccactttgtcatcgttgttttgattcaaacaaagaaattaaggct
ctggtctcagagctaagtaaaaaaatcactagtctccctcaaaagagagcagacaatgaa
agccgtttggaaagagaagagatgcgytaccagaagatcttgaaccttggaccagtcaaa
gacaatcttgagaagctagagtccacagagatacaagaaactaagagcagacttgctgaa
atctcatctgayattgaacaaacagacatgaacatcacagagcttgaagatgtsttaagt
ttgacagaaagtgaagaaataacagtgaggcagatggagcctgacttacgagaagctgaa
agtttgaaacacggactwttagacctagatagaaatatatctctgtatcagtccaaatta
catggaatagctccaggacgtacaatgcaggctgtaaccaatgaaatcaatgacagacaa
gatcgctcggaaacacttgaccgccatattgatcggcgtcggagagcacttacacaatta
cagagaaccatatcgacacaggaatcccacttgaatgaattgaaatcacaaaagttggag
ttaacacagcagttacagaaaagaactaatttagaaggacagaaagctgaattgagcgca
agaaatgatgctttggagcgagaaattaaggaagctgagtctcaagccagacctatccag
gaaatgcttaaccaagaagaaaacaacaagcaagagattgtctctgctaaggaggccatg
gaagatgaaaatagaaaaatgttaaccgaaataagaaccaatggagacaaactgagagaa
aagatcagtgaaataaagaggtacattartgaaggcaatgaatcagccttacaggacaac
gaagaaagactaactaatctagagaatagagaagtacaactttaccagagaaaagagtct
gtgacacaaaaaattgacacactcaaagargacatygcaaaacaagagatcaaagcacgt
gaccttgaagataacatcaatttaaagagaacccarcaagacattaaggayatggaagga
aagattcactcggctgaagctcatttaagacaatatggagaccagcgaagtctaaacagt
gaaagattgacactccaacgtcagtcccatgacatgcgcaaagagaaagcccaactagaa
ggaaggcaaaagggttatgaagatgaaataaaaagatttcaatctgaacttcgtagcaat
cagtayaggaatgcagaagacaaacacagagagaaagtaattgagatgaagactacccaa
atggcaagtgttgacctggacaagtactacaaagcattagacagggccattatgaagtat
catggtctcaagatggctgagatcaacaagattattaaagagtactggatcaacacctac
aagggaaatgatattgatactattgagataagatctgatgaagaggagggtagtggagca
agtaaagctagaagaacctacaattacagggtcgtcatgattaaaggagatactgcttta
gacatgagaggaagatgcagtgctggtcaaaaggttcttgcatcactaatcataagattg
gctttggctgaaaccttttgtttgaactgcggtatctttacattggacgaacctacgacy
aatttagacgaggataacatcacaagtcttgctgaccaattagcgagtgtgatacgcaca
aggcatgcgcaaaagaactttcagcttattgtcatcacacacgacgagggtttcgttgat
attcttggtcgtgctgactttgtcgaycattactacagaatatataaagataacgaagga
aattcaaggattgcaaaaaatarcgtcgcatcgttaaaccaccgagaagaatcctacctg
tcttga
DBGET
integrated database retrieval system