KEGG T05080: 110253844

Exaiptasia diaphana (Aiptasia): 110253844

Entry

110253844         CDS       T05080

Name

(RefSeq) cleavage and polyadenylation specificity factor subunit 4

K14404

cleavage and polyadenylation specificity factor subunit 4

Organism

epa Exaiptasia diaphana (Aiptasia)

Pathway

epa03015

mRNA surveillance pathway

Brite

KEGG Orthology (KO) [BR:epa00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110253844
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:epa03021]
    110253844
   03019 Messenger RNA biogenesis [BR:epa03019]
    110253844
Transcription machinery [BR:epa03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     110253844
Messenger RNA biogenesis [BR:epa03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     110253844

SSDB

Motif

Pfam:

zf-CCCH zf_CCCH_4 zf-CCHC Torus zf-CCCH_3 zf-CCCH_4 zf-CCHC_4 zf-CCCH_2 zf-CCHC_3 zf-CCHC_2

Other DBs

NCBI-GeneID:

110253844

NCBI-ProteinID:

XP_020916454

UniProt:

A0A913Y9N3

LinkDB

Position

Unknown

AA seq 258 aa
MQDIVAGVSDIILDIEYQLKHQVGCQPLPFPGMDKSSAAVCEFFVNNTCTRGAYCPFRHT
SGEKTVVCKHWLRGLCKKGDQCEFLHQYDMTKMPECYFYSKFGECSNKECQYLHIDPQSK
IKDCPWYDRGFCKHGPHCRHRHVRRVICINYLCGFCPEGPNCKHKHPRFELPIVKDENVE
KKLNITCHSCGQPGHKASSCPQNPQKENFKPNNANVPSSMGDQQIFGRRPLETVTCFKCG
DKGHYANKCPKSRSDLIG

NT seq 777 nt +upstreamnt +downstreamnt
atgcaggatatcgtagcgggcgtttcggacataattttagacattgaatatcaactcaag
catcaggtaggatgccaacctctaccgttcccaggcatggacaagtccagtgcagcagta
tgtgagttctttgtgaacaatacctgtacccgaggtgcctactgtccatttagacacacg
tctggtgaaaagacagtcgtttgtaaacattggctgagaggtttatgtaagaaaggggac
caatgtgagtttttacatcaatatgacatgaccaagatgcctgagtgttatttttattcc
aaatttggagagtgcagtaacaaggaatgtcagtacttacatattgatccccagtccaag
ataaaagactgtccttggtatgacaggggattctgtaaacatggtccacactgccgtcat
cgtcatgtccgtagggttatatgtattaattatttatgtggattttgtccggaaggtcca
aattgtaagcataaacacccaaggtttgaactcccaattgtcaaggacgagaatgtagag
aaaaagttaaatatcacrtgtcatagttgtggtcaacctggacacaaggcatcgtcatgc
ccacaaaatcctcaaaaagaaaacttcaagcccaataatgcaaatgtgccttcatcgatg
ggcgatcaacagatcttcggtagacggccattagaaactgtgacatgcttcaagtgtgga
gataaaggtcattatgctaacaagtgcccaaagtcaagatcagatttgattggataa

DBGET integrated database retrieval system