Exaiptasia diaphana (Aiptasia): 110254098
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Entry
110254098 CDS
T05080
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
epa
Exaiptasia diaphana (Aiptasia)
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
epa03009
]
110254098
Enzymes [BR:
epa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110254098
Ribosome biogenesis [BR:
epa03009
]
Eukaryotic type
Pre-60S particles
Helicases
110254098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
CTE_SPB4
Helicase_C
CTT_SPB4
ResIII
AAA_19
AAA_22
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
110254098
NCBI-ProteinID:
XP_020916712
UniProt:
A0A913Y954
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MAATWSECSVNLSNLTLLSVKNLGFQTMTPVQSATIPLFMTNKDVAVEAVTGSGKTLAFL
IPIIEILNRREDKLKKHEIGALIITPTRELAKQIEEVLGHFEHESIGISHMLFIGGAETA
NDVKRFKENGGNIVIGTPGRLEDLLTRQHQHGVDLASHLKCLEVLVLDEADRLLDLGFAA
SINSILGFLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVTEKSNKNKVGCTAVACIY
AGLQSFPWNPCQTDDRQPCCLFELGVLVCTDVMARGVDIPEVNWVIQYDPPSSANAFVHR
CGRTARIGNEGNAVVFLLPQEDSYVQFISINQKVPLQKLEIDKEFPNLIPKFKKLATKDR
DLFEKGTKAFVSFVQAYRKHECSLIFKFKDLDLGRLAEGFGLLKLPKMPELKDVNVQGFS
PVIMDYDKIPYQTKIREKQRQLKLQEQKDGNTKQKNNKRKATNDXSWSKNKERVLKRAKR
KARRDFQRKQKHKFDDDELDELADEARLVKKLKTGKITKSEFDDVFIGTEDSTEMNSGP
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgtggagtgaatgttccgtaaatctttccaatttgactcttttatctgtc
aaaaaccttggatttcagacaatgacgcccgttcagtcagcaacaattccgttgtttatg
accaataaggatgtagcagttgaagcagttactggatcaggaaaaactttagcctttcta
atccctatcattgagattttaaatagaagggaagacaaattgaaaaagcatgagattgga
gctttgatcataacgccaacaagggagcttgctaagcaaattgaagaggtccttggtcac
tttgaacatgaatcaattggcatcagtcatatgctttttattggtggggcagaaactgca
aatgatgtcaagagattcaaggaaaatggtggtaatattgtcattggaacccctggacga
ttggaagatttattaacaagacaacatcaacacggagtagatttagcttcacatctcaag
tgcttggaagttctggttcttgatgaagctgatagactcttggacttagggtttgcagca
agcattaattcaatcttgggatttttaccaaagcaaagaagaactggtttgttctctgct
acacagacagatgaagtagaagctctggtcagagcaggtctcaggaatccggtcagagta
acagtcacagagaaatcgaacaaaaataaggtgggttgcactgcagttgcatgcatatat
gctggtttgcaatcattcccttggaatccctgtcagacagacgataggcagccatgttgt
ttgtttgagctaggtgttcttgtttgtaccgatgtaatggctagaggagtagatatccca
gaagtcaattgggtcatacagtatgatcctcctagtagtgcaaatgcctttgtacataga
tgtggcagaacagcacgaatcggaaatgaagggaatgcggtggtttttctactgcctcaa
gaagattcatatgtacagtttatatccataaatcaaaaggtaccacttcagaaactggaa
atagataaagaatttcctaaccttataccaaaattcaaaaagctagctacaaaagatagg
gatctatttgaaaaaggaacaaaagcatttgtgtcgtttgtgcaggcttatcgcaagcac
gagtgcagtcttatttttaaatttaaagacttagatcttggtcgactagcggagggattt
ggacttcttaagctaccaaaaatgcccgagttaaaagacgttaatgtacaaggattttca
ccggtgattatggattacgacaaaatcccttaccaaacaaaaatccgcgaaaaacaacga
cagctcaaactacaagaacaaaaagatggaaacactaaacagaagaacaataaacgaaag
gcaactaatgatcrgtcttggtctaaaaacaaagaaagagtcttaaaacgagctaaaaga
aaagcaagaagagacttccagcgaaaacagaaacataaatttgatgatgatgagcttgat
gaacttgcygatgaggcgcgattggtgaaaaagttaaaaactggcaaaatcacaaaaagt
gaattcgatgatgtattcattggaacagaggactcaacagagatgaattcaggtccgtaa
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