KEGG   Exaiptasia diaphana (Aiptasia): 110254293
Entry
110254293         CDS       T05080                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
epa  Exaiptasia diaphana (Aiptasia)
Pathway
epa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:epa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110254293
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:epa03019]
    110254293
Messenger RNA biogenesis [BR:epa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     110254293
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd CSTF1_dimer Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_EML Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_NWD2_C Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_WDR41 Beta-prop_WDR75_2nd Beta-prop_IFT140_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st Tricorn_2nd Beta-prop_Vps41 Beta-prop_DCAF12 WD40_like KNTC1_N
Other DBs
NCBI-GeneID: 110254293
NCBI-ProteinID: XP_020916924
UniProt: A0A913Y8S6
LinkDB
Position
Unknown
AA seq 428 aa
MKMEEAVKERENLYKLIISQLRYDGCEAIAASLAKTTNIISPCPPSARLHQVVNLGLRAE
AEGSRPENPQLPGLTSNTKVPAKGIDLEYEPDDHGTTPPAAMYETYYVTAHKAPCRTAAF
SASGRLVATGSVDASIKVLDVDRMVAKNTMPQTHDQGQGMNLENHPVIRTLYDHQEEVTA
VEFHPSASVLVSGSKDCTIKLFDISKPSVKKAYRAIQEAEVINSMSFHPCGDFILVSTEH
PTIRLYDINTFQCFVSANPREFHTAPVTMVKYAPTGNLYASSSVDGSIKVWDGVSNKCVA
TFPQAHKGAEVYTVQFSHNSKYLISCGKDNIVFLWELSTGRAVNMYTGAAMSNYRTQAVF
NHTEDFILVADEKNKSISCWNTRTTEKQKSLISGHNNHIRHLVHSPAGAAFISCSDDFRA
RFWYCEGV
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgaagatggaagaggccgtgaaagagcgagaaaatctctacaaactaattataagccaa
ctacgatatgatggatgcgaggccattgctgctagcctggctaaaactaccaacattata
agtccatgtcctccatcagcaagactacatcaagttgtcaatcttggattaagagcagaa
gctgaaggctctaggccagagaatccccaattacctggacttactagtaacaccaaggtt
ccagccaagggaattgatctggaatatgaaccagatgatcacggaaccactccaccagca
gccatgtatgaaacctattacgtcactgctcataaagcaccgtgtaggactgcagcattt
agtgccagcggtagactagtggcgacgggttctgtagatgcgtcaatcaaggttcttgac
gtggatcgaatggttgcaaaaaacacgatgcctcagacacacgaccaaggacaaggaatg
aacctggaaaaccaccccgtaatacgaaccctgtacgaccatcaagaggaagtcacggct
gtggagtttcatccatcggcgtctgttttagtgtctgggagtaaagactgtaccattaaa
ttatttgacatctcaaaaccctcggtgaagaaagcttatcgggcaattcaggaagcagaa
gtgatcaactccatgtcatttcatccttgcggtgattttattctagtcagcacagagcat
ccaacgattcgactctacgatatcaacacgtttcaatgcttcgtctcagcaaatcctagg
gagttccacacagcacccgttaccatggtcaagtatgcccctacagggaatctttatgca
tcgtcaagtgtggatggatccattaaggtttgggatggagttagcaataaatgtgttgca
acgttccctcaggcccacaagggcgcagaggtctacacagttcaattctcacacaactct
aaatatctcatatcgtgtggcaaggataatattgtgtttctatgggaactatcgacagga
cgagctgtaaatatgtacacaggmgcagcgatgtcaaactatcgaactcaagctgtattc
aaccataccgaggatttcattcttgttgccgacgagaaaaataaragtatatcatgctgg
aacacaagaaccacagaaaaacagaagtcgcttatttcaggtcataacaatcatatccgc
catctggtccattctcccgccggggctgcgttcatttcgtgtagcgatgatttccgcgca
agattctggtattgtgagggtgtgtag

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