Erwinia persicina: CI789_00205
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Entry
CI789_00205 CDS
T05618
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
epe
Erwinia persicina
Pathway
epe03410
Base excision repair
epe03430
Mismatch repair
epe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
epe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CI789_00205 (recJ)
03430 Mismatch repair
CI789_00205 (recJ)
03440 Homologous recombination
CI789_00205 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epe03400
]
CI789_00205 (recJ)
DNA repair and recombination proteins [BR:
epe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CI789_00205 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CI789_00205 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CI789_00205 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AXU97737
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Position
43893..45611
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AA seq
572 aa
AA seq
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MNRKTELRRREATDAAALPADLHPLLHRLYARRGIQQASELERGAKYLHPFQSLSGIQTA
ATLLQQALADNLCIMIVGDFDADGATSTALTVLALRSMGGQNVKYLVPNRFDDGYGLSPE
VVEQAAARGAQLILTVDNGISSHAGVTLANEKGIAVIVTDHHLPGDTLPEAAAIVNPNLA
DCDFPSKSLAGVGVAFYLMLALRAQLRDSGVTTLPNLAELLDLVALGTVADVVPLDANNR
ILVWQGLSRIRAGKCRPGIRALLEIANRDARQLAASDLGFALGPRLNAAGRLDDMSVGVA
LLLSEDLGQARMLASELDALNQTRKEIEQGMQSEALALCDKLESTSEALPLGIAMYHPEW
HQGVVGILASRLKERFNRPVIAFAPAGDGTLKGSGRSIAGLHMRDALERLDTLNPGLIIK
FGGHAMAAGLSLEEANFERFRQCFSELVGDWLDAESLQGIVWSDGELMAQELTLPTAELL
REAGPWGQAFPEPTFDGKFRLLQQKLVGERHLKVMIEPLGGGPLLDGIAFNIDATLWPDP
SVRQVELAYKLDVNEFRGNRTVQLIIEHLWAL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcgtaaaactgaactccgtcgtcgcgaggcgacggacgctgctgcactccctgcc
gatcttcacccgctgttacatcgtctgtatgcccgccggggcatacagcaggccagtgag
ctggagcggggggcgaaatatctgcaccccttccagtcgctgagtggtattcagacggct
gcgactcttttacaacaggcgctggctgacaacctctgcattatgatcgtcggtgatttc
gatgccgacggcgccaccagcaccgcgctgaccgtgctggcactgcgcagcatgggcggg
cagaacgtcaagtatctggtccccaaccgttttgatgacggttatggtctgagcccggaa
gtggtggagcaggccgcagcccgtggtgcccagctgatcctgaccgtagataacggtatc
tcctcacacgccggggtgaccctggccaacgagaaaggcattgcggtgatcgtgaccgat
caccacctgccgggtgatacgttaccggaggcggcagccatcgttaaccctaatcttgct
gactgtgattttccctccaagtcgctggcgggcgttggcgtggcgttctacctgatgctg
gcgctgcgcgcgcagttgcgcgacagcggggtgacgacactgcccaatctggcagagctg
ctggatctggtggcgctgggtaccgtggccgacgtggtgccgctggatgctaacaaccgc
attctggtctggcaggggctgagtcgtatccgtgccggtaagtgccgtccgggaattcgg
gcactgctggaaattgctaaccgcgatgcgcgtcagctcgccgccagtgatctgggcttt
gccctcgggccgcgtctgaatgcggctggaagactggatgatatgtcggtcggcgtggcg
ctgctgctgagtgaagatctgggccaggcgcgaatgctggccagcgagctcgacgcgctg
aatcagacgcgtaaagagatcgagcagggaatgcagtccgaagccctcgccctgtgcgat
aaactggaaagcaccagcgaagcgctgccgctgggtatcgctatgtaccatcctgagtgg
catcagggggtagtcggcattctggcatcccgtctgaaagagcgtttcaaccgtccggtg
attgcctttgcaccggcaggtgacgggacgctgaaaggatcgggacgctcaattgccggg
ctgcatatgcgcgatgcgctggagcggctggatacactgaatccggggctgatcattaaa
tttggtggccatgcgatggcggcaggcctgtcgctggaagaagctaactttgagcgcttc
cgccagtgtttttctgaactggtgggggactggctcgatgctgaatccctgcagggcatc
gtctggtctgatggcgaactgatggcccaggagctgacgttaccgacggccgaactgctg
cgcgaagcgggcccgtgggggcaggcgttcccggagccgacgtttgacggtaagttcagg
ctgctacagcagaagctggtgggcgaacgtcatcttaaagtgatgattgagccgctgggc
ggcgggccgctgctggacggcatcgcctttaatattgatgcgacgttgtggcccgatccg
agtgtccggcaggtagagctggcgtacaagctcgatgtcaatgagttccgtggtaaccgc
actgtgcagctgattatcgaacatctctgggcattgtaa
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