Erwinia persicina: CI789_01245
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Entry
CI789_01245 CDS
T05618
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
epe
Erwinia persicina
Brite
KEGG Orthology (KO) [BR:
epe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
epe03009
]
CI789_01245
Enzymes [BR:
epe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CI789_01245
Ribosome biogenesis [BR:
epe03009
]
Prokaryotic type
rRNA helicases
CI789_01245
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_11
CMS1
P-loop_SecA
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXU93976
UniProt:
A0A3S7RZS2
LinkDB
All DBs
Position
complement(276873..278201)
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLQALQEKGYTRPTAIQAEAIPAALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADQAREMAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLVLDEADRMLDMGFAQDIETIAAETRW
RKQTLLFSATLEGEAIKDFAERILNEPIEIEADPARRERKKIQQWYYRADDIKHKTALLI
HLMKQPEVTRAVVFVRKRERVHELCGWLREAGINTSYLEGELVQAKRNEAIKRVAEGRVN
VLVATDIAARGIDIDDVSHVFNFDMPVTADTYLHRIGRTGRAGKKGIAISLVEAHDNMLL
GRICRYIKEPLKARTIDGMRPTTRAPSEKLKGKPSKKVLAKRKELKDKEKLEEKPRVKER
HRDAKNVGKRRKPTAAKTDSAE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaccactttttccgaactcgaactagacgagagcctgctgcaagccctgcag
gagaaaggctatacgcgccctactgccattcaggcagaagccattccggcagcactggag
ggtcgcgacgttctgggttcggcaccaaccggtacaggcaagactgcggcctacctgctg
cccgcactgcaacatttgctcgacttcccgcgtaagaagtccggcccgccgcgcattttg
atcctgaccccaacccgtgagctggcaatgcaggtcgcagaccaggcgcgtgaaatggcg
aaacacacgcacctggatattgccaccatcaccggcggcgtggcgtatatgaaccatgct
gaagtgttcagcgaaaaccaggacatcgtggtcgccaccaccggacgtctgctgcagtac
atcaaagaagagaactttgactgtcgtgcggttgaaacgctggtgcttgatgaagcagac
cgcatgctcgacatgggctttgcccaggacatcgaaaccatcgcggctgaaactcgctgg
cgcaagcagaccctgctgttctctgccacgctggaaggggaagcgattaaagatttcgcc
gagcgcattctgaacgagcccattgagatcgaagccgatccggcacgccgtgagcgcaaa
aaaatccagcagtggtactaccgtgcggacgacatcaaacataaaaccgcgctgttaatc
cacctgatgaagcagccggaagtcacccgagctgtggtcttcgtacgcaagcgtgagcgc
gtgcacgagctgtgtggctggctgcgcgaagccggcatcaacaccagttacctggaaggg
gaactggtacaggcgaagcgtaatgaagcgattaagcgcgttgcggaaggccgtgttaac
gtgctggtggcgaccgatatcgccgcccgcggaatcgacattgatgatgtcagccacgtg
tttaacttcgacatgccggtcaccgctgacacctacctgcaccgtattggccgtaccggc
cgtgcaggtaaaaaaggcattgcgatttcactggtggaagcacatgacaacatgctgctg
ggcaggatctgccgttacatcaaggagccgctgaaagcgcgcaccattgatggaatgcgg
ccgacgacccgtgcgccgagtgaaaaactcaaaggcaagccgtcgaagaaagtgctggcg
aagcgcaaagaactgaaagacaaagagaagctggaagaaaaaccgcgtgttaaagagcgt
caccgcgacgctaaaaacgtgggtaaacggcgtaagccgaccgcagccaaaacggacagt
gctgaataa
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