Erwinia persicina: CI789_06950
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Entry
CI789_06950 CDS
T05618
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
epe
Erwinia persicina
Brite
KEGG Orthology (KO) [BR:
epe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
epe03016
]
CI789_06950
Enzymes [BR:
epe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CI789_06950
Transfer RNA biogenesis [BR:
epe03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CI789_06950
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AXU97824
UniProt:
A0A3S7TG99
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All DBs
Position
1500922..1502031
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AA seq
369 aa
AA seq
DB search
MITTNEALADVCQRARQVSALALDTEFVRTRTYYPRLGLIQLFDGETISLIDPLPITDWT
PFRDLLLDQQIVKYLHAGSEDLEVFQHEFGVLPQPMIDTQILAAFSGRPLSCGFATIVES
FTGIALDKSESRTDWLARPLTEKQCVYAAADVFYLLPVAEKLMAETEAAGQMAAALDECR
LLCQRRTTVTDPQEAYRDITNAWQLRPRQLAALRLLAAWRLTLAREKDMAVNFVVREENL
WKVARYMPGSLGELDHLGLPGQEIRFHGKAMVAMVAEASAMAEDRLPEPVPNLIDYPHYK
QVFKSLKALVAETAEKHGVSQELLASRRQINQLLNWHWKLKPQAGKPELVDGWRGALLGE
GIAALLAAE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccaccaatgaagcgctggccgacgtgtgccagcgtgcccgtcaggtttccgcg
ctggcgctggacactgaatttgttcgtacccgcacctattatcctcgcctgggcctgatc
cagctgtttgacggggaaaccatctctctgattgacccactgccgatcacagactggacg
ccttttcgcgatcttttgctggatcagcaaatcgtcaagtatcttcatgcgggaagcgaa
gacctggaagtgttccagcacgagtttggcgtcctgccgcagccgatgattgatacccag
atccttgcggcgttcagcggtcgtccgctgtcctgtggctttgcgaccatcgttgagtct
tttaccggcatcgcactggataagagcgagtcacgcacggactggctggcgcgtccgtta
acggaaaagcagtgcgtctatgcggccgcagatgtgttctatttgctgcccgtagcggaa
aagctgatggcggaaaccgaagcggcagggcagatggccgccgcacttgatgagtgccga
ctgctgtgccagcgtcgtaccacggtgacagacccgcaggaggcgtatcgcgatattacc
aatgcctggcaactgcgtccccgtcagcttgccgcactgcgcctgctggcggcctggcgt
ctgacgctggcccgtgagaaggacatggcggttaattttgtcgtacgtgaagaaaaccta
tggaaggtggcacgctatatgccgggttctctgggtgaactggaccacctgggtctgcca
gggcaggagattcgtttccatggtaaagcgatggtggccatggtggccgaagccagtgca
atggctgaggatcggttgcccgagccggtgccaaacctgatcgattatccccattacaaa
caggttttcaaaagtctgaaggcgctggtggcagaaacggcagaaaagcacggcgtcagc
caggaactgctggcatcacgtcgtcagattaatcagttgctgaactggcactggaagctg
aagccacaagcgggtaaaccggaactggtagatggctggcgtggggcactcttgggagag
ggcatcgctgcactgttagcggcggagtag
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