Erwinia persicina: CI789_07355
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Entry
CI789_07355 CDS
T05618
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
epe
Erwinia persicina
Brite
KEGG Orthology (KO) [BR:
epe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
epe03032
]
CI789_07355 (topA)
03400 DNA repair and recombination proteins [BR:
epe03400
]
CI789_07355 (topA)
Enzymes [BR:
epe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CI789_07355 (topA)
DNA replication proteins [BR:
epe03032
]
Prokaryotic type
DNA Topoisomerases
CI789_07355 (topA)
DNA repair and recombination proteins [BR:
epe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CI789_07355 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
CK_II_beta
Toprim_2
DUF7784
Motif
Other DBs
NCBI-ProteinID:
AXU95054
LinkDB
All DBs
Position
1587223..1589823
Genome browser
AA seq
866 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSTVKKSADSTTSKTTKKVK
KDEKTALVNRMGVDPYHGWDANYQILPGKEKVVAELKALAEKADHIYLATDLDREGEAIA
WHLREVIGGDESRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKVARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWDLNAELTTPKGVDLPMQVTH
QGDKPFRPVNREQTHAAVSLLEKARYVVADREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGHITYMRTDSTNLSQDAVSMVRGYIEDEFGAKYLPKAANVYSSKEN
SQEAHEAIRPSDVKVQSEQLKDMENDAQKLYQLIWRQFVACQMMPAQYDSTTLTVEAADF
KLKAKGRTLRFDGWTRVMAALRKGDEDRVLPDVAVGSELSLQQLVPSQHFTKPPARFSEA
SLVRELEKRGIGRPSTYASIISTIQDRGYVKVESRRFYAEKMGEIVTDRLEESFRDLMNY
DFTAHMEDNLDKVAKNEAQWKAVLDQFFAEFSDQLAQAEKDPEEGGMQPNQMILTSIDCP
TCSRQMGIRTASTGVFLGCSGYALPPKERCKQTINLIPENEVLNILEGDDAETNALRARR
RCQKCGTAMDSYLIDPQRKLHVCGNNPECDGYEIEQGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMSCTNDECKNTRKILRSGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPQVEELQRFRDRLPEKLRYLADAPATDPDGNKAVVRFSRKTKQQYV
STEKDGKATGWSAFFVDGKWEVTAKK
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagctctcgtaatagttgagtccccggcaaaagccaaaacgatcaataaatat
ctcggtaatgactacgtggttaaatccagtgtgggccatatccgcgatttgccgaccagt
ggatcaacagttaaaaagagcgctgactctacaaccagtaaaacaaccaaaaaggtcaaa
aaagacgaaaagacggccctggtcaaccgtatgggcgtcgatccttatcatggctgggat
gctaattaccagatcctgccaggtaaggaaaaagttgtcgctgagctgaaggcactggct
gagaaagctgaccacatctatctcgcaacggaccttgaccgcgaaggggaagccattgcc
tggcacctgcgggaagtgatcggtggcgatgagtcgcggtacagtcgcgtcgtgtttaac
gaaatcaccaaaaatgcgattcgacaggcgtttgaaaagccgggcgaactgaatatagac
cgtgttaatgcccagcaggcgcgccgatttatggaccgtgttgtgggctacatggtatcg
ccgctgctgtggaaaaaagtggcgcgtgggctgtccgctggccgcgtccagtcggtcgcg
gtgcggctggtggtggagcgtgagcgcgaaatcaaagcgtttgttccggaagagtactgg
gatctgaacgctgagctgaccacgccgaaaggggttgatctgccgatgcaggtcacccac
cagggtgataagcctttccgtccggtgaaccgtgagcagactcacgccgccgtcagcctg
ctggaaaaagcacgctatgtggtggccgatcgtgaagataagccgaccagcagtaagcca
ggcgctccgttcattacgtccacgcttcagcaggcagccagcacccgcctgggctttggc
gtgaagaaaaccatgatgatggcccagcgtctgtatgaggccggccatattacttatatg
cgtaccgactcaaccaacctgagccaggatgccgtcagcatggttcgcggctacatcgaa
gatgaattcggcgcgaaatatctgccgaaagccgccaatgtctacagcagcaaagagaac
tctcaggaagcgcatgaagccatccgtccctcagatgtcaaagtgcagtccgagcagctg
aaagatatggaaaacgacgcgcagaagctgtatcagttgatctggcgtcagttcgtcgcc
tgtcagatgatgcccgcgcagtacgactccaccacgctgaccgttgaagccgcagacttc
aaactcaaggcaaaagggcgcacgctgcgctttgatggctggacacgagtgatggctgca
ctgcgtaagggtgatgaagatcgcgtgttgccagacgttgcggttggcagtgaactcagc
ctgcagcagttggtgccgagccagcacttcaccaagcccccggctcgcttcagcgaagcc
tcgctggtgcgtgagctggaaaaacgcggtatcggtcgtccttcaacctacgcttcgatt
atttcgaccattcaggatcgcggatatgtgaaggttgaaagccgccgcttctatgcagaa
aaaatgggcgagattgtcacagaccgtctggaagaaagcttccgcgatctgatgaattat
gactttactgcccacatggaagacaatctcgacaaggtcgcgaaaaacgaagcgcagtgg
aaagcggtgctggatcagttctttgccgagttcagcgaccagctggcgcaggcagaaaag
gatccggaagaaggcggtatgcagcctaatcagatgatcctgacctcgatcgactgcccg
acctgtagccgtcagatgggtattcgcacggcgagcaccggcgtgttcctgggctgctct
ggctatgcgctaccgccgaaagagcgctgcaagcagacgattaacctgatccccgagaat
gaagtgctgaatattctcgaaggggacgatgcggaaaccaatgcgctgcgtgcccgtcgc
cgctgccagaaatgcggcacggcgatggacagctacttaatcgaccctcagcgcaagctg
cacgtctgcggtaataatccggagtgtgatggctacgagatcgaacagggcgagttccgt
atcaaggggtatgacggtccgatcgtagagtgcgagaaatgtggttctgaaatgcacctg
aaaatggggcgctttggtaagtacatgtcctgtaccaatgacgagtgcaaaaatacgcgt
aaaattctgcgcagcggcgaagtggcaccaccgaaagaagatccggtcccactgcctgaa
ctgccgtgtgagaagtcagatgcgtattttgtcctgcgtgacggggctgccggtgtgttc
ctggccgctaataccttccctaaatcgcgtgaaacccgcgcgccgcaggtagaggagttg
cagcgcttccgcgatcgcttaccggagaaactgcgctatctggccgatgccccggcgacc
gatccggacggcaataaagccgtggtgcggttcagccgcaaaacgaaacagcagtacgtc
agcacagaaaaagacggaaaagccactggctggtctgccttcttcgttgacggcaaatgg
gaagtcaccgcgaagaagtaa
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