Erwinia persicina: CI789_13755
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Entry
CI789_13755 CDS
T05618
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
epe
Erwinia persicina
Brite
KEGG Orthology (KO) [BR:
epe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epe03400
]
CI789_13755
DNA repair and recombination proteins [BR:
epe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CI789_13755
Archaeal homologous recombinant proteins
CI789_13755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
cobW
ZapB
nSTAND3
TsaE
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXU96187
LinkDB
All DBs
Position
2912878..2916237
Genome browser
AA seq
1119 aa
AA seq
DB search
MKILTLRFKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LKSITQSQNDLMTRDTAECLAEVEFEVKGVAWRAFWSQNRARGAADGNLQAPRVELARCD
DNQIVADKVKDKLEMIATLTGLDFERFTKSMMLSQGQFAAFLNADANKRAELLEELTGTE
IYGRLSSAVFERHKQAKVLLDTLRAQSGGMALLSEAQQDSLNTQLAQSIAEEQALTSQQQ
GRQQKVHELQQLEQLQRERQLLITRAQQLDEQRQQAHTALTAVAAAQQQALLAQEQHQTL
HLQQDTLIAEKVLPLDLQLSALREQVQQLAREQNEHQQTFASRQQESVQNLQLQTEKQLQ
QRQLNDWRSAHAQYERYGESLPLWRERFRQQQESEQSLTSLRQQVATRQQALVQYEQACE
RLQQQQTPLQQQLSAAEQALAQARQQLVPLQQKHPEETLRAVLAQCARQRPQRLLLATLL
PQGQQLNGRLVRLQQEHQALTQQIQQNSEQLLTLRALWKEKYQHQQDLDKRCELERRIAD
LEQHRAQLEAGQPCPLCGSETHPAVQAYQALQISENQQRLATLRHEVEQLKEEGSTLGAQ
LKQAQAQEARLQEERNDLGRQLQQLEQQWQNAAGALSLTLTPQQPAQVSEWLAEQEQQES
TLQQQLQQLEQALRHCQQQKEGLYQQQQSWQHLQQQIQLQQQERDAAVQALNAQQQQLEQ
DEARTQQRLSSLAEALRALDLSLPQDGDYQGWLQRCEQQWQAWQRNSEALAALVPELATL
ASRQQALEDELQQQQTRLNAGDQRLQQQQSMLNQLQQQRQALFGDRQVAEVQQQLRAAAT
QHDRDVRQAQVQWQSQQDRINTLTGQHKSLNEQLITLQSKLDDALTKTGKVDDLPARRAL
LEAELHGLNQQLRELASQQGQLRQQLRDDSERRTRQQALLAEIAANEQHLEDWSYLNQLI
GSREGDKFRRFAQGLTLDHLVWLANNQLNRLHGRYLLQRKSQEALELQVIDTWQADAQRD
TRTLSGGESFLVSLALALALSDLVSHKTRIESLFLDEGFGTLDAETLDSALDALDALNAS
GKTIGVISHVEAMKERIPVQIRVKKINGLGYSRLETPVA
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgaccttacgctttaaaaacctcaattcgctcaaaggtgaatggaaaatt
gattttaccgctgagccgtttgccagcaacgggctgtttgccatcaccggcccgaccggt
gcgggaaaaaccacgctgctggatgccatctgcctcgcgctgtatcacgaaaccccacgg
ctcaagagcattacccagtcacaaaatgacctgatgacgcgtgatactgccgaatgtctg
gccgaggtggaatttgaggtaaaaggggtggcgtggcgcgccttctggagccagaaccgt
gcacgcggtgccgctgacggcaatttacaggccccgcgcgtggaactggcgcgctgcgat
gataatcagatcgtggccgacaaagtcaaagacaagctggagatgatcgccacgctgacc
ggactggactttgagcgctttacgaagtccatgatgctgtcgcagggccagttcgccgcg
tttctcaatgccgatgccaataaacgcgctgaactgctggaagagctgaccgggaccgaa
atttacggaagactctcttcggcggtgtttgaacgacacaaacaggcgaaggtgttactg
gataccctgagggcgcagtccggcggcatggctttgttaagcgaagcgcagcaggacagc
ctgaatacgcagctggcacaaagcattgcggaggagcaggcacttacttcgcagcagcag
ggccggcagcaaaaagtgcatgaactgcaacagcttgagcagctgcaacgggaacggcag
ttgctgatcacccgcgcacagcagctggacgaacagcggcagcaggcgcacaccgcactg
acggcagtggcggcggcacagcagcaggctttgctggcgcaggagcagcaccagacgctg
catctgcagcaggacactctgatagccgaaaaagtgctgccgctcgatctgcaacttagc
gctctgcgggagcaggttcagcagctggcgcgtgagcagaatgagcatcagcagactttc
gcttcccgtcagcaggaaagcgtgcagaaccttcagttgcagacggaaaaacagttgcag
cagcgacagcttaacgactggcgcagcgcccatgcgcagtatgaacgttacggagagtct
ctgccgctgtggcgggaacgtttccgtcagcagcaagagagtgagcagtcactcacatct
ttgcgccagcaggtggcgacccgccagcaggcactggtgcagtatgaacaggcctgcgag
cggcttcagcagcagcagacgccgctacagcagcagctctccgccgcagaacaggcactt
gctcaggcccggcagcagctggtgccgctgcaacagaagcacccggaagaaaccctgcgc
gcagtgctggcgcagtgtgcccggcagcggccccagcgcctgctgctggcaacgctgctt
ccgcagggtcagcagctgaacggccgcctggtccggttacaacaggaacatcaggcgctg
acgcagcagatccagcaaaacagtgagcagttacttacgctgcgtgcgttatggaaagag
aagtatcagcatcagcaggatcttgataaacgctgtgagctggaacggcgcattgccgat
ctggagcagcaccgggcgcagctggaagccggccagccctgcccgctttgcggttcagaa
acccatccggcggtgcaggcgtatcaggcattacagatttcagaaaaccagcagcggctc
gccaccctcaggcacgaagttgaacaactgaaagaggaaggaagcaccctcggcgcacag
ctgaaacaggcgcaggcgcaggaggcccgtctgcaggaggaacggaacgatctgggtcgt
cagctgcagcaactggaacagcagtggcagaacgccgcgggcgcgctctcactgacgctg
accccacaacagcctgcgcaggtcagtgaatggctggcagagcaggagcagcaggaaagc
accctgcagcagcagttgcagcagctggagcaggccctgcgccactgtcagcagcagaag
gaagggctttatcagcaacagcagtcctggcaacacctgcaacagcaaatccaactgcag
caacaggagagggacgccgccgtgcaggccctgaacgcacaacagcagcagcttgaacag
gatgaagcgcgtacacaacagcgcctcagcagcctggcagaagcgctgagggcgctggat
ctgtcactgccgcaggatggcgactatcagggctggctgcagcgctgcgaacagcagtgg
caggcatggcaacgtaacagcgaggcgctggccgcgctggtgcccgaactggccactctc
gccagccgccagcaggcgctggaagatgaactgcagcagcagcagacacgactgaacgca
ggggatcagcgcctgcagcagcagcagtcgatgctgaaccaactgcagcagcagcgtcag
gcgctgtttggcgatcgacaggtcgcagaagttcagcagcagctgcgggcggccgccacg
cagcacgatcgggacgtgcgccaggctcaggtgcagtggcagtcgcagcaggaccggata
aatactctgaccggacagcataaatcactaaatgaacagttgattactctgcagtcgaaa
ttagacgatgccttaaccaaaacaggcaaggtcgacgacctccctgcccgccgtgccctg
ctggaagctgaactgcacgggctgaaccagcaactgcgtgagctggccagccagcagggc
cagctgcgtcagcagctacgcgatgacagcgaaaggcgaactcgccagcaggcgctgctg
gctgagattgccgctaacgagcaacatcttgaggactggagctacctgaatcagctgatt
ggttccagagagggggataaattccgccgttttgcacaggggctgacgctggatcatctg
gtgtggctggcgaacaatcagctgaaccgtctgcacgggcgctatctgctgcagcgaaaa
tctcaggaagcgctggagctgcaggtgatcgatacctggcaggcggatgcacagcgcgat
acccgcacgctgtcaggcggggaaagttttcttgtcagcctcgcactggcgctggcgtta
tcagatctggtcagccacaaaacccgcattgagtcgctgttcctggatgagggatttggc
acgctggatgcggaaacgctcgacagtgcgctggacgcgctggatgcactgaatgccagc
gggaaaacgattggagtgatcagccacgtggaggcgatgaaagagcgcattccggtgcag
atcagggtgaagaagattaacggactgggctacagcaggctggaaacgcctgtggcgtag
DBGET
integrated database retrieval system
