Erwinia persicina: CI789_14385
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Entry
CI789_14385 CDS
T05618
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
epe
Erwinia persicina
Pathway
epe03030
DNA replication
epe03430
Mismatch repair
epe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
epe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CI789_14385
03430 Mismatch repair
CI789_14385
03440 Homologous recombination
CI789_14385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
epe03032
]
CI789_14385
03400 DNA repair and recombination proteins [BR:
epe03400
]
CI789_14385
Enzymes [BR:
epe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CI789_14385
DNA replication proteins [BR:
epe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CI789_14385
DNA repair and recombination proteins [BR:
epe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CI789_14385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AXU96295
LinkDB
All DBs
Position
complement(3031730..3035212)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKTGPLVKNAAKMGMPAIGITDFTNLCGLVKFYGTAHSQ
GIKPIIGADFNVSSEAMGDELSQITVLAADNEGYQNLTLLISRAYQRGYGPAGPTIDRDW
LVEHQQGIILLSGGRRGDVGKMLLRGNTAQVTECLAFYQHHFPDRYYLELIRTGRQDEET
YLHAAVELAISQGVPVVATNEVCFLTETEFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFLDIPEALENSVEIARRCNVTIRLGEYFLPQFPTGEMTTEDFLVAKSKEGL
EERLAFLFPDEKVRAERRGEYDERLDIELTVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAE
MYGRQAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARILEGVTRNAGKHAGGVVIAPTKITDFAPLYCDENGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALAMINARREKQGEPPIDIAAIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYSLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKSRGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGQYQFHVNDAGEIVYGIGAIKG
VGEGPIEAIIEARNEGGYFRELFDLCARTDTKKLNKRVLEKLIMSGAFDRLGPHRAALMS
ALPDALKAADQHAKAEAIGQADMFGVLAEAPEQVEKSYSDVTPWPEQIQLDGERETLGLY
LTGHPINQYLKEIERYVGGLRLKDMHPTERGKMTTAAGLVVAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKFQHMLEKDRILIVSGQVSFDDFNGGLKMMARDMMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARAKLRFGATWRVSPSD
RLLNDLRSLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttattcatttacgcgttcacagtgactactccatgatcgatggg
ctagcgaaaactggcccgttggtgaaaaacgcggcaaaaatggggatgccggccatcggc
atcactgacttcacgaacctgtgcgggctggtgaaattctacggtaccgctcacagccag
ggtatcaagcccattatcggtgccgatttcaacgtcagcagcgaagccatgggggatgag
ctgtctcaaatcaccgtactggcggctgataatgaaggctatcagaacctgacgctgctg
atttcccgcgcttaccaacggggttatggtcccgcaggcccgacaatcgatcgtgactgg
ctggtagaacatcagcagggcatcatcctgctgtccggtgggcgccgtggtgatgtcggc
aaaatgttgctgcgcggtaatacggcacaggtgaccgagtgtctggccttttatcagcac
cattttcccgaccgctattatctggaactgatccgtacgggccgtcaggatgaagagacg
tatctccacgcggcggtagagctggcgatctcgcagggcgtgccggtggtggcgactaac
gaagtctgtttcctgacggaaacggaatttgatgctcatgaaattcgcgttgccattcac
gacggctttaccctcgacgatcctaaacgtccccgcaactacagcccgcagcagtacatg
cgcagtgaagaggagatgtgcgagctgttcttggacattccggaagcgctggaaaatagc
gtggaaattgcccgtcgttgcaacgtcaccatccgtctgggtgagtatttcctgcctcag
ttccccaccggtgagatgaccacagaagattttctggtggcaaaatcaaaagaagggctt
gaggaacgtctggcgttcctgttcccggatgagaaggttcgcgccgagcgccgcggtgaa
tatgacgaacgtctggacattgaactgacggtgattaaccagatggggttccctggttac
ttcctgatcgtcatggaattcatccagtggtcgaaggataacgatgtcccggtgggcccg
ggacgtggatcgggtgcgggctcgctggtggcctatgcgctgaaaatcactgacctcgac
ccgctggaattcgatctgctgtttgaacgattcctcaaccctgaacgtgtttcaatgcct
gactttgacgtcgatttctgcatggaaaaacgcgacctggtgattgagcacgtggcagaa
atgtacgggcgtcaggccgtatcgcagatcattaccttcggtacgatggccgccaaagcg
gtgatccgcgacgtagggcgcgtgcttggccatccttatggttttgtcgatcgcatctct
aaactggtgccgcccgacccggggatgacgctggaaaaggcctttgccgccgaacctcag
ctgcctgaaatttatgaagcagatgaagaagttaaggcactgattgatatggcgcgcatc
ctggaaggggtgacgcgtaatgccggtaaacacgccgggggcgtggtcatcgcgccgacc
aaaattaccgacttcgcgccgctgtactgcgacgagaatggcaaccatccggttacgcag
tttgataagaacgacgtggaatatgccggcctggtgaagtttgacttcctgggcctgcgc
accctgacgatcattgactgggcgctggcgatgattaacgcccgccgcgaaaagcagggt
gagccgccgatcgatatcgcggcaattccgcttgaagataaaaaaagtttcgatatgctg
caacgctcggagactactgcggtcttccagcttgaatcacgcggcatgaaagacctgatc
aaacgcctgaagccagactgctttgaggatatgattgcactggtcgccctgttccgcccc
ggcccgctgcagtccggcatggtggataactttattgaccgtaaacacgggcgtgaagag
atctcctatccggatattcagtggcagcatgagtccctgaagcctgtgctggaaccgacc
tatggcatcatcctctatcaggaacaggtgatgcagatagcccaggtgctggcgggatac
agcctcggcggtgccgatatgctgcgtcgtgcaatgggtaaaaagaacccggtcgagatg
gccaagcaacgcggcggctttgaagacggtgcgaaatcgcgcggcatcgacggtgagctg
gcgattaaaatttttgacctggtggagaaattcgccggctacgggtttaacaagtctcac
tccgccgcctatgcgctggtttcctaccagacgctgtggctgaaggcgcactatccggct
gaatttatggcggcggtcatgaccgctgatatggataatactgagaaagtggttggcctg
gttgatgagtgctggcggatggggctgaaggtgctgccgccggatattaactccggacag
tatcagttccacgttaacgatgcgggtgaaatcgtttacggtattggcgcgatcaaaggt
gtgggtgaaggtccgatcgaagcgatcattgaagcccgtaacgaaggtggctatttccgc
gaactgtttgacctgtgcgcccgcactgatacgaagaagctgaataagcgggtgctggaa
aagctgattatgtccggtgcctttgatcgcctcggcccgcaccgcgcggcactgatgagt
gcgctaccggatgcactgaaagcggccgatcagcatgcgaaagcggaagccatcggccag
gccgacatgtttggcgtgctggccgaagccccggaacaggttgagaagtcttactcggat
gtcactccctggccggaacagatccagctggatggcgaaagggaaacgttagggctttac
ttaacgggtcacccaatcaaccagtacctgaaagaaattgagcgctatgtcggtggactg
cgcctgaaagacatgcacccgaccgagcgtggtaagatgaccacggctgccggtctggtg
gtggcggcccgtgtgatggtaacaaaacgcggtaaccgtattggcatctgcacgctggat
gaccgttctggtcgtctggaagtgatgttgtttacagatgcgttagataagttccagcat
atgctggagaaggaccgtatcctgatcgtcagtgggcaggtcagcttcgatgacttcaac
ggcgggcttaaaatgatggcccgcgatatgatggacatcgatgaagcacgtgaaaaatat
gcacgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttgaaccgt
ctccgtcaatccctggaaccccatcgttcggggacaattccggtacatctctactatcag
agagaggatgcgcgggcgaagttgcgctttggtgcaacctggcgcgtgtcgccgagcgat
cgtttgctgaacgatctgcgatcgttgataggatcggagcaggtggaactggagtttgac
taa
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