Erwinia persicina: CI789_14555
Help
Entry
CI789_14555 CDS
T05618
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
epe
Erwinia persicina
Brite
KEGG Orthology (KO) [BR:
epe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epe03019
]
CI789_14555
Enzymes [BR:
epe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CI789_14555
Messenger RNA biogenesis [BR:
epe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CI789_14555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
HA2_N
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXU97911
LinkDB
All DBs
Position
complement(3074767..3077217)
Genome browser
AA seq
816 aa
AA seq
DB search
MSLLPVSAVLPELLAALQTSPQVLLAAPTGAGKSTWLPLQILQQAGFDGRILLLEPRRLA
ARNVAQRLAELLGEEPGETVGYRMRGESRCGKNTRLEVVTEGILTRMLQQDPMLDGVSLV
ILDEFHERSLQGDLALALLLDVQGGLRDDLNVLIMSATLDNSRLRDWLPQAPLISSEGRS
FPVERRYQPLASHLRFEEAVARQASQLLREESGSMLLFLPGVAEIQRVQTQLAERVDGDV
DLCPLYGALTLAEQRRAILPAPAGRRKVVLATNIAETSLTIEGIRLVVDSAQERSAQFDV
RSGVTCLQTQRVSQASMTQRAGRAGRLEPGICVHLLAKEQAERAAAHSDPEILHSDLASL
WLDLLQWGCQEAGQLRWLDAPPAAGIAAARQLLLQLGATDDTGRLTTGGRKMAALGSEPR
FAALLMAAGNDAGAVATAAELVAILEDPVRGSADLRDSFHRRLPQWQRRARQLQQRLNIS
GGRPDEDLIAPLLAAAFPDRIARRRGVDGRYQLANGSGASLDREDGLTRYEWLIAPALLQ
GSGQPDARILQALPLDIDRLISQRPGLVQQQTEVEWDEEKGTLRAWRREQIGQLVLKSQP
LAKPAEDELHAAMLRWVRSKGLSVLNWTPQAEQLRVRLRCAAQWLAEGEWPDMQDSALLA
ALEQWLLPAMRGIRDGKGLRQLDLTSALLQRLTWAQRQQLDSLLPTHYVVPTGSRLPIQY
DRDKPPALAVRLQEMYGEAKNPCVANGRVPLVLELLSPAHRPLQITRDLAAFWSGAYREV
QKEMKGRYPKHLWPDDPANTTPTSRVKRFASPGNGK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttattaccggtcagtgccgtgctacccgagctgttagcggcattgcagacgtca
ccgcaggtgttactggctgcgcccaccggggcgggaaaatccacctggctcccgctacag
atcctgcagcaggccggatttgacgggcggatcctgctgctcgaaccccgcaggctggcc
gcacgcaatgtggcacagcggctggctgagctgctgggtgaggaacccggcgaaaccgtg
ggctaccgtatgcgcggcgaaagccgctgcggcaaaaatacccggctggaggtcgtcacc
gaaggtattctgacgcggatgctgcagcaggatccgatgcttgatggcgtatcgctggtg
atccttgatgagttccacgagcgcagcctgcagggagacctggcgctggcgctgttgctt
gacgttcagggcggcctgcgtgatgacctgaacgtgctgattatgtccgcaacgctggat
aattcacggctgcgggactggctgccgcaggcccccttaatcagttcagagggacgttca
ttcccggtggagcgtcgttatcagccgctggcaagccacctgcgttttgaggaggcggtt
gcccgccaggccagtcagcttttgcgtgaagagtcaggttcaatgctgctgttcctgccc
ggtgtggcggaaatccagcgcgtgcaaacgcagcttgcggaaagggtggacggtgatgtt
gacctctgtccgctgtacggtgcgctgacactggccgaacagcgccgggcgatcctgcct
gcgcccgccgggcggcgtaaagtggtgctggcaacgaatattgccgaaaccagcctgacg
attgagggtatccgtctggtggtggacagcgcccaggagcgcagcgcgcagtttgatgtg
cgcagcggggtgacctgcctgcaaacccagcgcgtcagccaggcatcaatgacccagcgt
gccggacgcgccgggcgtcttgaacccggcatctgtgttcatctgctggcaaaggagcag
gctgaacgcgccgctgcgcacagcgacccggagatcctccacagcgatcttgcctccctg
tggctcgatctcctgcagtggggctgccaggaggcgggccagctgcggtggctggatgcg
ccgcccgctgccgggatcgcggcagcgcggcagctgctgttgcaactgggtgcgacggac
gataccggcaggctgacgaccggtggccgtaaaatggccgcgctgggcagtgagccgcgc
tttgcggccctgctgatggccgccggtaatgatgccggtgcggtggcgacggcggcggag
ctggtggcaatactggaggatccggtacgcggcagtgccgacctgcgcgacagcttccat
cgccgtctgccgcagtggcaacgtcgcgcccgtcagctgcaacagcgactgaacatcagc
ggcggacggccggatgaagatctgattgcgccgctgctggcggcggcatttcccgaccgt
atcgcccggcgtcggggggtagacggacgctatcagttagccaacgggagcggagcctcg
ctggatcgtgaggacggtttaacccgctatgagtggctgattgccccggcgctgctgcag
ggaagtgggcaacccgacgcacgtattttacaggcgctgccactggatatcgacaggctg
atcagccagcggcccgggctggtacagcagcaaacggaagttgaatgggatgaagaaaaa
ggcacgctgcgcgcctggcgacgggagcagattggtcaactggtgctgaaatcccagccg
ctggcaaaacctgccgaagatgaactgcacgccgccatgctgcgctgggtgcgcagtaag
ggcctgtcggtgctgaactggacgccgcaggcagagcagctccgggtgcggctgcgctgc
gctgcgcagtggctggcggaaggggagtggcccgatatgcaggatagcgcgctgctggca
gcacttgagcagtggctgctgccggccatgcggggcatccgggatggcaaagggctgcgt
cagcttgatctcaccagcgccctgttacaacggctgacctgggcgcagcgccagcaactg
gacagcctgttgcccacccactatgtggtgcccaccggcagccgtctgccaattcagtac
gatcgggacaagcccccggcgctggcggtacgtctgcaggagatgtacggtgaggcgaaa
aacccctgcgtggccaacggacgcgtgccgctggtgctggagctgttatccccggcacac
cgtcccctgcagatcacccgcgacctggcggccttctggtcgggggcctatcgggaagtc
cagaaagagatgaaagggcgctatcccaaacacctctggccggacgatcctgccaacacc
acacccaccagccgggtgaaaagatttgcttccccgggaaatgggaagtga
DBGET
integrated database retrieval system
