KEGG   Erwinia persicina: CI789_20980
Entry
CI789_20980       CDS       T05618                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
epe  Erwinia persicina
Pathway
epe02020  Two-component system
epe02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:epe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CI789_20980
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CI789_20980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:epe03021]
    CI789_20980
Transcription machinery [BR:epe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CI789_20980
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: AXU97457
UniProt: A0A354DPD9
LinkDB
Position
complement(4452223..4453656)
AA seq 477 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDIHEEVDTRE
YQETEALDTREALEQKDMPEELPLDATWDEIYTAGTPSGTGTDYHDDELPVYQGETTQTL
QDYLMWQVELTPFTDTDRAIATSIVDAVDDTGYLTASLEEILESMGSDDLTIDEVEAVLK
RVQRFDPIGVCARDLRDCLLVQLSQFSADFPLLKEARLIVSEHLDLLANHDFRSLMRVTR
LKEEVLKGAMQVIQALDPRPGQSINTQEPEYVIPDVLVRKVSNRWTVELNADSVPRLKIN
QHYASLGSSSRSDSDSQFIRSNLQEAKWLIKSLESRNDTLLKVTRCIVEQQQAFFEQGEE
HMRPMVLADIASAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLISAENPVKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttacaactcaggctgagtcaacagcttgccatgacgccacagttgcag
caggccattcgcctgctgcaactctctacgcttgaactacagcaggaaattcagctggcg
ctggaaagtaacccgttgcttgaacaaaccgacattcatgaagaagtcgatacccgcgaa
tatcaggaaactgaagcgctggatacccgggaagcgctggaacagaaggacatgcctgaa
gaactgccgctggacgccacctgggacgaaatttataccgcagggaccccctccggtacc
gggacggattatcacgatgatgaactgcccgtctatcagggtgaaactacccagacgctg
caggattatctgatgtggcaggtggaactgacgccgttcaccgacaccgaccgggcgatc
gccacctcgattgtagatgcggtggacgatacggggtatctgacggcctcgctggaagaa
attctggaaagcatgggcagcgacgacctgactatcgacgaagtggaagcggtgctgaaa
cgtgtacagcgctttgatccgattggcgtttgtgcgcgtgatttacgcgactgtctgctg
gttcagctttcacagttttctgccgacttccccctgctgaaagaagcgcgtctgattgtc
agcgagcatcttgatctgctggcgaatcatgattttcggagtctgatgcgtgtcacccgc
cttaaggaagaggtgctcaaaggtgcgatgcaggtgattcaggcgcttgacccgcgcccg
ggacagtcaatcaatacgcaagaacctgagtatgtcatccctgatgtgctggtccgtaaa
gtcagtaaccgctggaccgttgagcttaatgccgacagcgtgccgcgcctgaaaatcaac
cagcactatgcatcgttaggttccagctcacgcagcgacagtgattcgcagtttatccgc
agtaatctgcaggaagcgaaatggctgataaaaagtctggaaagtcgtaacgatacgctg
ctgaaagtcacgcgctgcatcgttgaacagcagcaggctttttttgagcaaggtgaagag
catatgcgtcccatggtgcttgcggatatcgccagtgccgttgaaatgcatgaatcgacg
atttcccgtgtgaccacccagaagtatctgcacagcccacggggcatctttgaactgaag
tattttttttccagtcacgtcaacaccgagggcggaggcgaagcctcatccacggctatc
cgtgcgctggtgaaaaagttaatctcggcggagaatcccgtcaaaccactcagcgacagc
aagctgacctccatgctttccgaacagggaattatggtcgcaaggcgcactgtggcaaaa
taccgagagtctttatccatcccgccatcaaatcagcgcaaacagctggtctga

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