Erwinia persicina: CI789_20980
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Entry
CI789_20980 CDS
T05618
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
epe
Erwinia persicina
Pathway
epe02020
Two-component system
epe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
epe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CI789_20980
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CI789_20980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
epe03021
]
CI789_20980
Transcription machinery [BR:
epe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CI789_20980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AXU97457
UniProt:
A0A354DPD9
LinkDB
All DBs
Position
complement(4452223..4453656)
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDIHEEVDTRE
YQETEALDTREALEQKDMPEELPLDATWDEIYTAGTPSGTGTDYHDDELPVYQGETTQTL
QDYLMWQVELTPFTDTDRAIATSIVDAVDDTGYLTASLEEILESMGSDDLTIDEVEAVLK
RVQRFDPIGVCARDLRDCLLVQLSQFSADFPLLKEARLIVSEHLDLLANHDFRSLMRVTR
LKEEVLKGAMQVIQALDPRPGQSINTQEPEYVIPDVLVRKVSNRWTVELNADSVPRLKIN
QHYASLGSSSRSDSDSQFIRSNLQEAKWLIKSLESRNDTLLKVTRCIVEQQQAFFEQGEE
HMRPMVLADIASAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLISAENPVKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttacaactcaggctgagtcaacagcttgccatgacgccacagttgcag
caggccattcgcctgctgcaactctctacgcttgaactacagcaggaaattcagctggcg
ctggaaagtaacccgttgcttgaacaaaccgacattcatgaagaagtcgatacccgcgaa
tatcaggaaactgaagcgctggatacccgggaagcgctggaacagaaggacatgcctgaa
gaactgccgctggacgccacctgggacgaaatttataccgcagggaccccctccggtacc
gggacggattatcacgatgatgaactgcccgtctatcagggtgaaactacccagacgctg
caggattatctgatgtggcaggtggaactgacgccgttcaccgacaccgaccgggcgatc
gccacctcgattgtagatgcggtggacgatacggggtatctgacggcctcgctggaagaa
attctggaaagcatgggcagcgacgacctgactatcgacgaagtggaagcggtgctgaaa
cgtgtacagcgctttgatccgattggcgtttgtgcgcgtgatttacgcgactgtctgctg
gttcagctttcacagttttctgccgacttccccctgctgaaagaagcgcgtctgattgtc
agcgagcatcttgatctgctggcgaatcatgattttcggagtctgatgcgtgtcacccgc
cttaaggaagaggtgctcaaaggtgcgatgcaggtgattcaggcgcttgacccgcgcccg
ggacagtcaatcaatacgcaagaacctgagtatgtcatccctgatgtgctggtccgtaaa
gtcagtaaccgctggaccgttgagcttaatgccgacagcgtgccgcgcctgaaaatcaac
cagcactatgcatcgttaggttccagctcacgcagcgacagtgattcgcagtttatccgc
agtaatctgcaggaagcgaaatggctgataaaaagtctggaaagtcgtaacgatacgctg
ctgaaagtcacgcgctgcatcgttgaacagcagcaggctttttttgagcaaggtgaagag
catatgcgtcccatggtgcttgcggatatcgccagtgccgttgaaatgcatgaatcgacg
atttcccgtgtgaccacccagaagtatctgcacagcccacggggcatctttgaactgaag
tattttttttccagtcacgtcaacaccgagggcggaggcgaagcctcatccacggctatc
cgtgcgctggtgaaaaagttaatctcggcggagaatcccgtcaaaccactcagcgacagc
aagctgacctccatgctttccgaacagggaattatggtcgcaaggcgcactgtggcaaaa
taccgagagtctttatccatcccgccatcaaatcagcgcaaacagctggtctga
DBGET
integrated database retrieval system