Exiguobacterium profundum: OE059_00595
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Entry
OE059_00595 CDS
T08917
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
epf
Exiguobacterium profundum
Pathway
epf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
epf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OE059_00595 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
epf03021
]
OE059_00595 (rpoB)
03400 DNA repair and recombination proteins [BR:
epf03400
]
OE059_00595 (rpoB)
Enzymes [BR:
epf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OE059_00595 (rpoB)
Transcription machinery [BR:
epf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OE059_00595 (rpoB)
DNA repair and recombination proteins [BR:
epf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OE059_00595 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
WED56711
UniProt:
A0ABY8B3I9
LinkDB
All DBs
Position
111646..115194
Genome browser
AA seq
1182 aa
AA seq
DB search
MTGQLVQYGRHRQRRSFARISEVLELPNLIEIQTASYEWFLREGLKEMFTDISPISDFTG
NLVLEFIDYSLSEPKYSIDESKERDVTYSAPLRVKVRLQNKETGELKEQEVFMGDFPLMT
ESGTFIINGAERVIVSQLVRSPSVYYNAKLDKNGKRGFGATVIPNRGAWLELETDAKDIV
YVRIDRTRKIPVTVLLRALGFGTDQEIIDLLGDDEYLRNTLEKDNTESTEKALIEIYERL
RPGEPPTVENAKSLLVSRFFDPKRYDLANVGRYKMNKKLHLKNRLFGQKLAETLVDPETG
EVLAEAGTILDRRNLDRILPHLENGLGYIDAEPTGGVAEGEPFGLQSIKVISPDDPDGER
ILNIIGNGNIDRSVKHITPADIIASINYFFNLLHEVGTTDDIDHLGNRRLRSVGELLQNQ
FRIGLSRMERVVKERMSIQDQNAITPQALINIRPVIASLKEFFGSSQLSQFMDQTNPLAE
LTHKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNE
YGFIEAPYRRVDPETGLVTGDIQYMTADEEDLYVVAQANMPLTEDGHFADEQVLCRFRGQ
NLSVEPSRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLLQPDSPIVG
TGMEYVSAKDSGAAIVAKYPGVVERVTAREILIRRTSDVNGSEVSGDLDRYKLQKYVRSN
QGTCYNQKPIIAAGDRVEKGEILADGPSMDMGELALGRNVVVAFMTWDGYNYEDAIIMSE
RLVKDDVYTSIHIEEYESESRDTKLGPEEITRDIPNVGDDALRNLDDRGIIRIGAEVKDG
DILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPNGGDGIILDVKVFDRENGD
ELSPGVNQMVRVYIVQKRKIHEGDKMAGRHGNKGVISRILPEEDMPYMPDGTPVDIMLNP
LGVPSRMNIGQVLELHLGMAAKKLGIKVATPVFDGAREEDVWATIEEAGMDKDAKTRLYD
GRTGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEILTIKSDDTVGRVKAYEAIVKGESVPKAGVPESFRVLIKELQALG
MEVKMMSADDEEVEMKDEDDDNIPNATSALEQVVQPTVTEEE
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
ttgactggtcaacttgttcagtacggtcgtcaccgtcagagaagaagctttgcccgtatc
agtgaggtattagagcttccgaatttgattgaaattcaaactgcttcttatgagtggttc
ttgcgtgaaggattgaaggaaatgttcacagacatttcaccgatttccgacttcacagga
aacctcgtattggagttcatcgattactcgctcagtgagccgaagtattcaatcgatgaa
tcgaaggagcgcgacgttacttattctgcgccacttcgcgtaaaagtgcgtctccaaaac
aaagagacaggtgagctcaaagaacaagaagtgttcatgggggatttcccgctcatgaca
gaatcgggaacgtttatcatcaatggtgcagaacgcgtcatcgtttcccagcttgtccgt
tcaccgagcgtgtactataacgctaaactcgataaaaacggtaaacgtggatttggcgca
accgtcatcccgaaccgtggtgcttggctcgaactcgagacagatgccaaagatatcgtt
tatgttcgtatcgaccgtacccgtaaaattccggtaacggtgttgttgcgtgccctcgga
ttcggtacggaccaagaaattatcgaccttctcggggatgacgaataccttcgtaacacc
cttgaaaaagataatacggagtctacagagaaagcgttgatcgagatttatgagcgtctc
cgtcctggtgaaccaccaacggtagaaaatgcgaaatctcttctcgtttcacgtttcttc
gacccgaaacgttacgacttagcgaacgtcggtcgctataagatgaacaaaaaacttcat
cttaagaaccgtttgttcggtcaaaaattagcggaaacgctcgtggacccggaaacaggc
gaggtactcgccgaagctggaacaatcctcgaccgccgcaacttagatcgtatcctcccg
cacttggagaacggccttggctatatcgatgcggaaccaactggtggtgtcgctgaaggt
gagccattcggtcttcagtcaatcaaagtcatctcaccggatgacccagatggagagcgt
atcttgaacatcatcggaaatggcaatatcgatcgcagcgtaaaacatattacgccagcc
gatattatcgcttcaatcaactacttcttcaacttacttcacgaagtcggaacaacagat
gacatcgaccacttaggaaaccgtcgtcttcgttcagtcggagaacttctccaaaaccaa
ttccggatcgggctttcccgtatggaacgtgtcgtaaaagaacgtatgtcgattcaagat
caaaatgcgatcacaccacaggcgctcatcaacatccgcccggttatcgcatcacttaaa
gagttcttcggtagctcgcaattgtcacagttcatggaccaaacgaacccgctcgcagag
ctcacgcacaagcgtcgtctctctgcacttggaccgggtggtttgacacgtgagcgtgcc
ggtttcgaagttcgagacgttcactattcgcactacggtcggatgtgtccaatcgaaaca
ccagaggggccgaacatcggactcatcaactcactctcgtcttatgcgaaagtgaacgag
tacggtttcatcgaagcaccataccgtcgtgttgacccagaaacaggtcttgtcactggc
gacattcaatatatgacggctgacgaggaagacctctatgtcgtcgcacaggcaaacatg
ccgctcacagaagatggccactttgcagacgaacaagttctttgccgtttccgcggacaa
aacttgtcagtcgagccaagtcgagtggactacatggacgtttcgccgaaacaggttgtt
tctgccgcaacggcatgtatcccgttcctcgagaacgatgactcgaaccgtgccctcatg
ggagcgaacatgcaacgtcaagcagtaccgctccttcaaccggattcaccgattgtcggt
accggcatggagtatgtatctgcgaaagactctggggcagctattgttgcgaaataccca
ggtgtcgtcgaacgcgtcacagcgcgtgaaatcttgatccgtcgcacgtctgacgtgaac
ggttctgaagtttcaggtgaccttgaccgttacaaacttcaaaaatatgtccgttcgaac
caagggacatgctataaccaaaaaccaatcatcgcagctggtgaccgtgtcgaaaaagga
gaaatccttgcagacggtccatcgatggatatgggtgagctcgcgctcggccgtaacgtc
gtcgttgccttcatgacatgggatggttacaactatgaggatgcgatcatcatgagtgag
cgtctcgtgaaagatgacgtgtacacgtcgattcatatcgaagagtacgagtcagagtca
cgcgacacgaaactcggaccagaggaaatcacacgtgatattccaaacgtcggagatgac
gcacttcgtaacttggacgatcgtggaattatccgcatcggagctgaagtcaaggatggc
gatatcctcgtcggtaaagtaacacctaagggcgttacagaattgacggcggaagagcgt
ctcttgcacgcaatcttcggtgagaaggcacgtgaagtacgtgatacgtcacttcgtgta
ccaaacggtggagacggaatcatcttggatgtcaaagtgttcgaccgtgaaaacggtgac
gagttgtctccaggcgtcaaccaaatggtacgtgtctatatcgttcaaaaacgtaagatt
cacgaaggggataagatggcgggacgtcacggtaacaaaggtgttatctcgcggatcctc
cctgaagaagatatgccatacatgccagacggtacaccggttgacatcatgctcaacccg
cttggggtaccatctcgtatgaacatcgggcaggtacttgaactccaccttggtatggca
gcgaagaagctcggtatcaaagtggcaacacctgtattcgatggagcgcgtgaggaagac
gtatgggcaacgattgaagaggctggtatggataaagatgcgaaaacgcgtctctatgac
ggtcgtacgggtgaaccgttcgataatcgcgtctcggtcggtgtcatgtacatgatcaaa
ctcgcgcacatggttgatgacaaacttcacgctcgttcgacaggaccatactcactcgtt
acgcaacaaccgctcggtggtaaagcacagttcggtggtcagcgcttcggggagatggaa
gtttgggctcttgaagcgtacggtgcagcctacacgctccaagaaatcttgacaatcaag
tcggatgacacggtcggtcgtgtgaaagcatatgaggccatcgtgaaaggcgagagcgtt
ccgaaagcgggcgttcctgagtcattccgcgtcttgatcaaagagcttcaagcgctcggt
atggaagtcaagatgatgtcagcggatgatgaagaagtcgaaatgaaagatgaagatgac
gacaacatcccgaacgcaacatcggcgttagaacaagtcgttcaaccgactgttacggaa
gaggaataa
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integrated database retrieval system
