Exiguobacterium profundum: OE059_04345
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Entry
OE059_04345 CDS
T08917
Name
(GenBank) Fis family transcriptional regulator
KO
K03092
RNA polymerase sigma-54 factor
Organism
epf
Exiguobacterium profundum
Pathway
epf02020
Two-component system
epf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
epf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OE059_04345
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OE059_04345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
epf03021
]
OE059_04345
Transcription machinery [BR:
epf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OE059_04345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
WED56095
LinkDB
All DBs
Position
820928..822073
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AA seq
381 aa
AA seq
DB search
MQRQEQKQIQQQQMTQDLVQRLPVLEADRLALVFRLARLARHNPNIHIGSGDVDWIADAA
SSFEEKLFTQIHEGSGSESEKALRRQLVLLLDHRGLLPDANEVLAERLGVDVTQIEQARQ
ALLFLEPTGIGARTERECQYRHAIEHEDPRVIDVFEAIESGMSPQQMTTALAISDEELAS
LERIVATLPKRPLLYEETGHVFPELEVRYEEGTLVTTWLSPELDETRVGNDREAKWWMTS
LSMRNETLREIWSIIEARQTEWLQGELVLHPLTRRTVAQLIGKHESTVGRAIQGKFAKTE
SGIMEWRHFFVRSTSRGHSPFMIKRTLAELIQRETAPQSDQALANELIRYGYQVTRRTVT
NYREELGFGNSRERERQVWKG
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcaacggcaggagcaaaaacaaattcagcaacaacagatgacgcaagacctcgtgcag
cggttaccggtccttgaagcggatcgtctcgcgctcgtattccggttggcgcgtcttgca
cggcataacccgaacattcacatcgggagcggggacgtcgattggattgcagatgcggca
agctcgtttgaagagaagctgttcacacagattcatgaggggagcggcagtgagtctgag
aaagcgttgcgacgacaactcgtcctcttgctcgaccatcgggggttattgccggatgcg
aatgaggtgttggcggagcgactcggtgtcgacgtcactcaaatcgaacaggcgaggcag
gcgcttttatttcttgaaccgacggggatcggggcgagaacggaacgggagtgtcaatat
cgacatgcgatcgaacatgaggaccctcgcgtcatcgatgtattcgaagcgatcgagagt
gggatgagtcctcaacagatgacgactgctctcgctatttcagatgaggaattggcaagt
cttgaacgaatcgtcgcgacacttccgaaacgtcctctattatatgaagaaacggggcat
gtttttccggaactcgaagtacgctatgaagaggggacactcgtcacgacgtggctcagt
ccggaactcgacgaaacgcgtgtcgggaatgaccgcgaggcgaaatggtggatgacgtcc
ctctcgatgcggaacgagacgctgcgtgagatctggtcaatcattgaagcacgtcagacc
gagtggctccaaggggaactcgttctccatccgttgacccggcggacggtcgcgcagctc
atcggaaagcatgaatcgacggttggccgagccatccaagggaagttcgctaagacagag
agtggcatcatggagtggcgacacttttttgtccggtcgacaagtcgtgggcattcgccg
tttatgattaaacgaacccttgccgaattgattcaacgggaaacggcaccacaaagtgat
caggcgcttgcgaatgaattgattcgatacggttatcaagtgacccggcggacggtgacg
aactatcgggaagagcttggattcggcaattcacgcgagcgcgagcgacaggtatggaag
ggatga
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integrated database retrieval system
