Exiguobacterium profundum: OE059_05250
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Entry
OE059_05250 CDS
T08917
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
epf
Exiguobacterium profundum
Brite
KEGG Orthology (KO) [BR:
epf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
epf03016
]
OE059_05250 (thpR)
Enzymes [BR:
epf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
OE059_05250 (thpR)
Transfer RNA biogenesis [BR:
epf03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
OE059_05250 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
WED56268
LinkDB
All DBs
Position
990930..991505
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AA seq
191 aa
AA seq
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MSTHYFIAIPIESTELVDVQQTILPYYSYRRIYRPEEFHMTIQFLGSVDGDELDEVKEIT
RRICEETLPFTLEFRAIDHFGRPDRPRVLTIVPDASEPLQRLAHSLRHELVDVIPRLDRK
SFVPHVTLAKKWGEGERVPYVPPEFHATESVEELILYEVQPTHTPAYRAVDVFPLRRPEE
DIWQSRLKFLT
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgcattactttatcgcgattcccattgaatcaacggaactggttgacgtacag
caaaccatcttaccttattactcctatcgccgaatctatcggcctgaagagtttcatatg
acgatacaatttttaggaagcgtggatggggatgaattagacgaagtaaaagaaatcacg
cgtagaatctgtgaggagactctgccgttcacgttggagtttcgagccatcgaccatttt
gggcgaccagatcggccccgcgttctaaccatcgttccggatgcctccgagccccttcaa
cggttggcgcattccctccgccatgaactagttgatgtgattccaagattggaccggaag
tcgtttgtccctcacgtgacactcgctaaaaaatggggcgaaggggagcgtgtcccatac
gtcccccctgaatttcacgcgacggaatcagtagaagaattaattttatatgaagtacag
ccgactcatacacctgcctatcgagcagtagacgtatttccgctaagacggccagaggag
gatatatggcaatcccggttaaaatttttgacgtaa
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