Exiguobacterium profundum: OE059_05555
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Entry
OE059_05555 CDS
T08917
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
epf
Exiguobacterium profundum
Pathway
epf03030
DNA replication
epf03410
Base excision repair
epf03420
Nucleotide excision repair
epf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
epf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OE059_05555 (polA)
03410 Base excision repair
OE059_05555 (polA)
03420 Nucleotide excision repair
OE059_05555 (polA)
03440 Homologous recombination
OE059_05555 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
epf03032
]
OE059_05555 (polA)
03400 DNA repair and recombination proteins [BR:
epf03400
]
OE059_05555 (polA)
Enzymes [BR:
epf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OE059_05555 (polA)
DNA replication proteins [BR:
epf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OE059_05555 (polA)
DNA repair and recombination proteins [BR:
epf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OE059_05555 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OE059_05555 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WED56323
LinkDB
All DBs
Position
1052443..1055037
Genome browser
AA seq
864 aa
AA seq
DB search
MNKLLVLDGNSLTYRAFFALPPMSDASGRNTNAVYGFTMMLLKLMEDEQPTHFAVAFDAS
KKTFRHDTFAEYKGGRQKTPGELREQFPLVRDVCRAFGISVLELDQYEADDIIGTLSKDP
TFDQVTVVTGDKDLLQLINERVTVYLTKRGITDVEKMTVTAFKERYDGLQPIQMIDLKGL
MGDKSDNIPGIPGVGEKTALKLIATYGTVEALYEHTDELKGKQKEKVEANEQEAKMSKQL
ATIYTDVPIDVTMDDLLFKPYDASVVKTLFMDLQFKSLIGKLTDTSSEEPVEKAERPTIA
LADQDLSRAVLMLEQLNDDYFEEDVIGVAIASERGVTIGDVTLLEDERVKEWIENETKTT
ICLDAKQTIIQLKRHQLALRGYEDLLVAGYLLNLSGGTSLSSIAAHFTYPLEEDETVYGK
GAKIKVPEENVFHAHLAEKAYAIYTLFERIVSELKENEQTELYEALEKPLVSVLAEMEWA
GIHVNVETLQHMETDLRERLNALEVTIHELAGEPFNINSPKQLGVVLFEKLSLPPVKKTK
TGYSTAADVLEKLAPLHPIIEKIMHYRELGKLQSTYVEGLQKVVKDDGKIHTRYTQTLTQ
TGRLSSVNPNLQNIPIRLEEGRRIRKAFTASEPGWVLYAVDYSQIELRIMAHMSQDEKMM
AAFLHDEDIHTSTAANVFKVSTEEVTSLMRRQAKAVNFGIIYGISDYGLSQNLGITRKEA
QTFIDTYFEQFPGVKTFMDAAIERAREHGFVETMLKRRRNIPDIHSRNFNLRGFAERTAI
NTPIQGTAADIIKKAMIDVDHALNTSKLQSKLLLQVHDELIFEGPAEEMEALEKLVTEAM
EHTVTLDVPLRADGAVGTTWFDTK
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactactagtccttgatgggaactccttaacatatcgtgcgttttttgcactg
cctccgatgtcggatgcgtcaggtcggaatacgaatgcagtgtatgggtttacgatgatg
ttattgaaactaatggaagatgagcaaccgactcattttgctgtggcgttcgatgcgtca
aagaaaacgttccgtcacgatacgttcgcggaatacaaaggtggacgtcaaaagacaccg
ggagaattgcgtgaacaatttccgctcgtgcgtgacgtttgtcgggcgtttggcatctct
gtcttagagctcgatcaatacgaggcggatgatatcatcgggacgctctcaaaagacccg
acttttgatcaggtgacggttgtgacgggggataaggatttacttcaattgatcaatgaa
cgtgtgacggtctatttgacgaaacgaggcatcaccgacgtcgagaaaatgaccgtgacc
gcgttcaaggaacgctacgacggactacaaccgattcagatgattgacctaaaaggatta
atgggagataaatctgacaacattcctggtattccaggggtcggggaaaagacggcactg
aagttgattgccacatacggtaccgtcgaggccctttacgaacatacggatgagttgaaa
gggaagcaaaaggaaaaagtagaggcgaatgaacaagaagcgaaaatgtcgaaacagttg
gcgaccatttacacggatgtaccgattgatgtgacgatggatgatcttctctttaagcca
tatgacgcttcggtcgtcaaaacgttatttatggatttacagttcaagtcactcatcggc
aaactgacggatacctcttcagaagaaccggttgaaaaagcggaacgaccaacaatcgcg
ttggccgatcaagatttatcgcgagctgtgttaatgcttgaacagctgaatgatgattat
tttgaagaagacgtgattggagtggcgatcgcttcggaacgaggtgtcacgattggagat
gtgacgcttcttgaggacgaacgggtcaaggaatggatcgaaaacgagacgaagacgacg
atttgtctcgatgcgaagcagacaattattcaattgaaacgtcaccaattggcactgcgt
gggtatgaagacctgcttgtcgcagggtatttgctcaacctatctggtgggacgtctctc
agctcgattgccgcacactttacgtatcctcttgaggaagatgaaacggtctacggaaaa
ggtgcaaaaatcaaggtgccggaagagaatgtttttcatgctcatctcgcagaaaaggcg
tacgccatctacacattgtttgaacgcattgtttcggagttgaaagagaatgaacagaca
gaactctatgaggcgcttgaaaaaccactcgtctccgtattggccgagatggagtgggct
ggtatccacgtaaatgtcgaaacgcttcaacatatggaaacggacctgcgtgaacgtcta
aatgcacttgaggtcacgattcatgaattagccggggaaccgttcaacatcaactcaccg
aaacagttaggggtcgtattatttgaaaaactgtcactccctcctgtgaaaaagacgaaa
acaggatactcaacggcagcggatgtcctcgaaaaattggcaccgcttcatccgatcatt
gagaaaatcatgcattatcgtgaacttggcaaacttcagtccacgtatgtcgagggcttg
cagaaagtcgtgaaggatgatggcaagattcatacgcgttatacacagacgcttactcaa
acgggacggctttcgtcggttaacccgaaccttcaaaatattccgattcgattagaagaa
gggcgtcgcatccgtaaagcgtttaccgcgagtgaaccgggatgggtactttatgcggtc
gattactctcaaatcgaactgcgcatcatggcacatatgtcacaagatgagaagatgatg
gcagccttccttcacgatgaggatattcatacgtcgacggcggcgaacgtgtttaaagtt
tccactgaagaagttacgtcactcatgcgtcgtcaagcaaaagccgtcaacttcggaatc
atctatggcatcagtgattatggactctcacaaaacctagggattacacggaaagaagcg
cagacctttatcgatacgtactttgaacagttccctggggtgaagacgttcatggatgcc
gcgattgaacgggcacgtgaacacgggttcgtcgagacgatgttgaaacgacgccggaac
atcccggacatccattctcgtaatttcaacttgcgtgggtttgctgaacgtaccgcaatc
aacacaccgattcaaggaacggcagcggacattattaaaaaagcgatgattgatgtcgat
catgcgttaaacacgtcaaaacttcaatctaagctgttgttacaagtacacgatgaattg
atattcgaaggtccggccgaagagatggaagcattagaaaaacttgtgaccgaagcgatg
gaacatacggtcacacttgatgtcccgttacgtgcggacggagcggttggaacgacatgg
tttgacacgaaataa
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