Exiguobacterium profundum: OE059_05560
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Entry
OE059_05560 CDS
T08917
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
epf
Exiguobacterium profundum
Pathway
epf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
epf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OE059_05560 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epf03400
]
OE059_05560 (mutM)
Enzymes [BR:
epf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
OE059_05560 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OE059_05560 (mutM)
DNA repair and recombination proteins [BR:
epf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OE059_05560 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_8
NFACT_N
Zn_ribbon_TFIIB
Zn_ribbon_6
Zn_ribbon_IS1595
RNHCP
Motif
Other DBs
NCBI-ProteinID:
WED56324
LinkDB
All DBs
Position
1055059..1055886
Genome browser
AA seq
275 aa
AA seq
DB search
MPELPEVETVCRRLRPAVSGKTIQSVDVLDPKIIRGLDPEEWVHHLIGETITDVERRGKF
ILFKLTNGYLVSHLRMEGKFFPYDSITEPVKHTHIVITFTDQSTLHYNDVRKFGTMELRT
NETIHTTPPLSLLAYEPFDERVTTEVLHRRLERMKTRAIKTALLDQSIFVGLGNIYVDET
LFRAGVHPTRPAASLSHEEVDRVRTEAIAVLTEAIERGGSTIRSYANPDGATGTFQERLY
VYGQTGEPCRRCGHEIEKMKLGGRGTHYCPHCQQR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagtcgaaacggtctgtcgtaggttgcgacctgccgtttcagga
aaaacgattcagtctgtcgatgtccttgaccctaaaattatccgcggactcgaccccgaa
gaatgggttcaccatttgataggagaaacgattacggatgtggaacgtcgggggaaattc
atcttattcaaattgacgaacgggtatctcgtctcccatcttcggatggaagggaagttt
ttcccttatgactccattacagaaccggtaaaacatacacatatcgtgattacgttcacg
gaccaatcgactctacactataatgatgtccgtaaattcggtacgatggagttgcggacg
aatgaaacgattcataccacaccaccgctctcattacttgcgtacgagccgtttgacgag
cgtgtgacaaccgaggtgttacaccgacgtttagagcgcatgaagacacgcgcgattaag
accgccctcctcgatcaatccatctttgttggattaggtaacatctatgtagatgagacg
ttgtttcgggcgggtgtccatccgacacgaccggccgcaagtttgtcacacgaagaagtc
gaccgtgtgcggactgaagccattgctgtattgactgaggccattgagcgtggaggtagt
acgattcgcagttatgccaatccagatggggccacaggaacgtttcaagagaggctctac
gtgtatggacagaccggagaaccgtgccgccgatgtggacatgaaattgaaaagatgaaa
ttgggcgggcgaggtacgcattactgtccgcactgtcaacaacgttaa
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