Exiguobacterium profundum: OE059_05945
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Entry
OE059_05945 CDS
T08917
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
epf
Exiguobacterium profundum
Brite
KEGG Orthology (KO) [BR:
epf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epf03019
]
OE059_05945
03009 Ribosome biogenesis [BR:
epf03009
]
OE059_05945
Enzymes [BR:
epf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OE059_05945
Messenger RNA biogenesis [BR:
epf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OE059_05945
Ribosome biogenesis [BR:
epf03009
]
Prokaryotic type
rRNA helicases
OE059_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DsrH
Motif
Other DBs
NCBI-ProteinID:
WED56398
LinkDB
All DBs
Position
1132421..1133764
Genome browser
AA seq
447 aa
AA seq
DB search
MNSFQQFKLLPFMVDALTEKRITKPTDIQARIIPAALNGRDIIGKSQTGTGKTLAFLLPI
VEAINPEDASVQAIVVAPTRELAWQIHEELKSILIKNPDYIKSSLIVGGTDRERQIDKMK
NPPQLIIGTPGRILDLMKAQALFPHKVTHFVVDEADQMLDMGFLPEVDRIAQALPEKLQT
MVFSATIPENLEPFLKKYLHDPRFAEASPEHRVAPKIKHHVIPVRHRDRKELTVEIAKAI
NPFVCLVFTNTKQEADELETSFREAGLNVGTLHGDMQARRRKQAIKDINDAKYQYVIATD
LAARGIDISGVSHVINHGIPKDLDFYTHRVGRTGRAGASGEAYTLYEDHENGPINRLEER
GFEFTHVDLRNGSIQPIKTRRRRQTDRKMKVSHTAHSRMAGEIKKAKKKVKPGYKKKFKY
KLKETASREHMQQQRSDRRAARKKNKR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
ttgaacagcttccaacagttcaaattgctaccgtttatggttgatgcgttaaccgaaaag
cgcattacgaaaccgaccgatatacaagcccgaattattccggctgccttgaatggtcga
gatattattggaaaatcacagacaggaacgggtaaaacacttgcgttcttgttaccgatc
gttgaagcgatcaacccagaagatgcttcagttcaagcaatcgtcgtcgcaccgacacgc
gaactcgcttggcagattcatgaagaattgaaatcgattcttattaaaaacccagattac
atcaaatcgagtttgattgtcggagggacagaccgcgaacgtcagatcgataagatgaaa
aatccgccacagttgatcatcgggacaccgggacgaatccttgatctcatgaaagcacag
gcgttattcccgcacaaagtgacacactttgtcgtcgatgaagccgatcaaatgctcgat
atgggattcttgcccgaggtcgaccgcatcgcacaggcgcttcctgaaaaactacaaacg
atggtcttctcagcgacgattcctgagaaccttgaaccgttcttgaagaagtaccttcat
gacccacgctttgcagaggcgagcccagaacatcgcgtcgcaccaaaaatcaagcaccac
gtgattccagtacgtcaccgtgaccgtaaagaattgactgtcgaaattgcgaaagcaatc
aatccattcgtttgtctcgtgttcaccaatacgaaacaagaggcagatgagttggagacg
tcgttccgcgaagcaggtctaaacgtcggtacgttgcatggtgacatgcaggcacgtcgc
cgcaaacaagccatcaaggacatcaatgatgcgaaatatcagtatgtgattgctacggat
ttagcggctcgcggtatcgatatttcaggagtctctcacgtcatcaaccacgggattccg
aaagaccttgatttctatacgcaccgtgtcggtcgtacgggacgtgcgggcgcatcaggt
gaggcgtacacactatatgaggaccatgagaatggaccaatcaacagacttgaagaacgt
gggttcgaattcactcatgtggacttgcgcaacggttcgattcaaccgatcaagacacgt
cgtcgtcgccaaacagaccggaagatgaaggtctcacacacggctcatagtcggatggcc
ggtgaaatcaagaaggcgaagaagaaagtgaagcctggctataagaagaaattcaagtat
aagttgaaagagacggcatcacgtgagcatatgcaacagcaacgctcggatcgccgtgca
gcacgtaagaaaaataaacgataa
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