Exiguobacterium profundum: OE059_06950
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Entry
OE059_06950 CDS
T08917
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
epf
Exiguobacterium profundum
Brite
KEGG Orthology (KO) [BR:
epf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epf03400
]
OE059_06950
DNA repair and recombination proteins [BR:
epf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OE059_06950
Archaeal homologous recombinant proteins
OE059_06950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_21
AAA_29
SMC_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WED56585
LinkDB
All DBs
Position
1319204..1322212
Genome browser
AA seq
1002 aa
AA seq
DB search
MRPVELMIQAFGPYAERETIDFTQLVGRSMFVVSGRTGAGKTTIFDAMTFALYGRASGSL
RNASDFRSQYAQPELKTEVDFSFTIRGDRYRIVRQPQQPHPKNKTPIPHEAILYEWEDGW
KPLATKVNEIQERIESILQLSYEQFSQILLLPQNQFRQLLDSNSNEKQQILQSIFKTEAY
RTFQEKWGERYSAYRKQVEWAVERTRLKLLELEDEAIEEVSTQSIEEIQRWLDEREEHLI
ATCETALAQKQTYATALEEARDALEKAKALITLFKEREETDRALAIFLNGESIRNETREL
LTNLEVAANIRPVFERLQELEQLVRRLSIEQQTSSTKLEHLQSTQSKLVERQPTIETDKE
EVISRKERLRIVDEMMPRIKERATLVTLRDRLMNRAKELAMFSKESRLQELQERERRLVD
SIKSEPSERAVDAERHVDRLVHLASLETKARELSKQLDECERTGKDVQRQYVTQQEVVTT
FTQQEQLILAKQLSETLVDGEPCPVCGSRHHDIPQHEETVTNIAERDAAVARLDDLSTRL
IEARADYRSLHQQLEAVRQELDQASKDIQFNGDVTEELNKWRTRAELLQREERMHQENER
TLRQLSAEIRQLEQEQRQQFEERERVVSELEMTQQSLYALGQSEETTFDALQRERADLEH
RISMLMKQVEAYDLEFETVKKALWKEEERLSLIREQLTEASKQYDAQQTIWVNQLEASHL
TRERYESYANQIDKRTMIREQLQREEEEGVRLRHHKQMIEEKLKNQERPDLHEMEMKVKE
VAECSEQASKQLITAQDALSRHRHVISEWNTLREQTAQEEQKLETIKLIADTGKGINPQK
MTFETYVQTAFFDQILHAANIHLDQMTSGQFRLERKVETAKGNAKSGLELLVFDAYTGQS
RRVQNLSGGEGFKASLSLALGLAEVVQQLSGGISLETMLIDEGFGTLDAESLDQAIELLM
SLQATGRLVGVISHVQELKDRVDARIEVKKSRSGSSIQLIVE
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgagaccggttgaattgatgattcaagcttttggaccgtatgcagaacgtgaaacgatt
gacttcacccagttggttggtcgctcgatgtttgtcgtaagcggtcggacgggcgccggg
aagacgaccatttttgatgcgatgacgttcgccctttatggtcgggcgagtgggtcgctt
cgaaatgctagtgacttcagaagccagtatgcacaacctgagttgaagacggaagtagat
ttttcgttcacgattcgaggtgaccgctatcggatcgtaagacagccgcaacaacctcat
ccgaaaaataagacgccaattccgcacgaggccatcctctatgaatgggaggacggttgg
aagccgctggcgacgaaggtgaacgagatacaagaacgaatcgaatcgattttacaatta
tcgtatgaacagttcagtcaaatcttgttgctccctcaaaaccaatttagacaattactc
gactcgaactcgaatgaaaaacaacaaatcctccaatccattttcaaaactgaggcatat
cgtacgttccaggaaaagtggggtgaacgctatagcgcgtatcgaaaacaagtggaatgg
gcggtcgagcggacacgactcaagttattagagctcgaagatgaagcaatcgaagaggtg
tcgacccagtccatcgaggagattcaacgttggctcgatgagcgtgaagaacatctgatt
gcaacgtgtgaaacggccttagcccagaaacaaacgtatgcgacagcacttgaagaggca
agagatgcacttgagaaagcaaaagcgctcatcaccctattcaaggaacgagaagagacc
gatcgagcacttgcaatctttttaaacggggaatcgattcgaaacgagacacgtgaactg
ctaacaaatttagaggtggcggcaaacattcgtccagtctttgaacggttacaggaacta
gagcaactcgtgcgtcggttgtcgattgaacaacagacctcctcgacaaaattagagcac
ttgcaatccacccaatcgaagttagtggagcgacaaccaacgattgaaacggacaaagaa
gaagtgatctctcgtaaagagcgactaaggattgtcgatgagatgatgccaagaatcaag
gagcgcgccacactcgtgacccttcgtgaccgattgatgaatcgtgcaaaagaattggcc
atgttttcaaaagaatctcggttacaagaacttcaagaaagagaacggcgattggtcgac
agcataaaatctgaacctagcgaacgagcagtcgacgccgagcgtcacgtcgaccgattg
gtgcatctggcctctcttgaaacaaaggcacgtgagttatcgaaacaactcgacgaatgt
gaacgaacgggcaaagacgttcaacgacagtacgtgacccaacaagaagtggtcaccacg
tttacacagcaagaacaattaatactagcgaaacaactgagcgagacgcttgtagacggt
gagccatgcccggtatgcggttctcgtcatcatgatatcccacaacacgaagaaaccgtt
acgaacatcgcggagcgggatgcggccgtggcacgtcttgatgatttgtccacacgctta
atcgaagcgcgggcggattatcgttcgcttcatcaacaacttgaagcagtccgacaagaa
ctagatcaagcttccaaagacattcaattcaatggcgatgtcacagaagaactcaataag
tggcgaacacgtgcagagctattgcagcgggaagaacgaatgcatcaagagaacgaacgg
acacttcgccaactgtcagcagaaatccgacagttagagcaagagcaacgtcaacagttc
gaagagcgggagcgtgtcgtatccgaacttgaaatgacgcaacaaagtctgtacgcactc
ggtcaaagtgaagaaacgacattcgatgcgttgcagcgcgagcgagccgaccttgagcac
cgcatctcgatgttgatgaaacaagtcgaagcgtacgaccttgagtttgagacggtgaaa
aaagcactttggaaagaggaagaacgactgtcattgatccgtgaacagttgactgaagca
tcgaagcagtatgatgcccagcagaccatttgggtcaatcagctagaagcatcacatctg
acgcgtgaacgctatgaatcatacgccaatcaaatcgacaaacggacaatgattcgtgaa
cagttgcaacgtgaggaggaagaaggtgttcgactccgacaccataaacagatgattgaa
gaaaaactgaagaatcaggagcgaccagacctgcatgagatggagatgaaagtgaaggaa
gtggctgaatgcagtgagcaggcgtcgaaacagctgatcacagcccaagatgccttgtct
cgacatagacacgtcatctcggaatggaatacccttcgcgaacagacggcgcaagaagag
cagaaattagagacaatcaaattgattgcggatacggggaagggaatcaacccacagaaa
atgacgtttgagacatatgttcaaaccgccttttttgatcagatccttcatgcggccaac
attcatttggatcagatgacgagcggtcagttccggcttgagcggaaagtcgagacggcg
aaagggaatgccaaatctggtcttgagcttctcgtctttgatgcctataccggacaatcg
cgtcgtgtacaaaatttatctggcggtgaagggtttaaggcgtcgttgtcactcgctctt
ggacttgcggaggtggtccaacagctgagtgggggcatcagtcttgaaacgatgctcatc
gatgaaggattcggtacgctcgatgccgaatctctagaccaggcgattgaattattgatg
tctttacaggcgaccggtcggctcgtcggcgtcatcagtcatgtccaagaattgaaagac
cgtgtcgatgcacggattgaagtgaaaaaatctagaagcgggtcgtcgatccagctgatt
gtggagtga
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