KEGG   Exiguobacterium profundum: OE059_07050
Entry
OE059_07050       CDS       T08917                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
epf  Exiguobacterium profundum
Pathway
epf03030  DNA replication
epf03430  Mismatch repair
epf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:epf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OE059_07050
   03430 Mismatch repair
    OE059_07050
   03440 Homologous recombination
    OE059_07050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:epf03032]
    OE059_07050
   03400 DNA repair and recombination proteins [BR:epf03400]
    OE059_07050
Enzymes [BR:epf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     OE059_07050
DNA replication proteins [BR:epf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     OE059_07050
DNA repair and recombination proteins [BR:epf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     OE059_07050
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: WED56603
UniProt: A0ABY8B622
LinkDB
Position
complement(1339578..1340144)
AA seq 188 aa
MNHTILALDVETANRDSRSICSVGWSILQNGDVVETDQRLVNPEEDFDMGNIRVHGIRPS
DVWDAPALPEVLSSLYPILQEVDLVIAHNASFDMGALRKAIVKYDLFDFPTIEYGCTVKL
SRKLYPGLPNHKLNTMAEHLNVPFIHHDAAEDARVCALLMRDMMQKTGITNPKELHRYTS
VKTGTLAY
NT seq 567 nt   +upstreamnt  +downstreamnt
atgaaccataccattctcgcacttgacgtggagaccgctaaccgtgatagtcgcagcatc
tgttctgtcggatggagcatccttcaaaatggtgatgtggtcgaaaccgaccagcgactc
gtcaatccggaggaagactttgatatgggtaacatccgcgtccatggcattcgtccgagt
gacgtgtgggatgcaccggcattaccggaagtactttcctctctttacccgattttacag
gaagtggacctcgtcatcgcacataacgcttcatttgacatgggcgccttgagaaaggcg
attgtgaaatatgatctattcgatttcccgacaatcgagtacggttgcaccgtcaaactg
tcacgtaaactgtatccaggactcccgaaccacaagttgaatacgatggcagaacacttg
aacgtgccgtttattcatcatgatgccgcggaagatgctcgtgtatgcgcgctactcatg
cgagacatgatgcaaaaaaccggcatcacaaacccaaaagaattgcatcgctatacgtca
gttaaaacaggaacgctcgcatattaa

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