Exiguobacterium profundum: OE059_11180
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Entry
OE059_11180 CDS
T08917
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
epf
Exiguobacterium profundum
Brite
KEGG Orthology (KO) [BR:
epf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epf03400
]
OE059_11180 (addB)
Enzymes [BR:
epf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OE059_11180 (addB)
DNA repair and recombination proteins [BR:
epf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
OE059_11180 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WED54609
LinkDB
All DBs
Position
complement(2142936..2146373)
Genome browser
AA seq
1145 aa
AA seq
DB search
MTVTFHVGRSGTGKSEQMIHEVIQELKQNPSGPTIYMIVPDQMSFEMEKKMATVDGLHGS
TRIQVLSMRRLAFLMMRDAGVATDQFLDQTGTHLLLRRVVEMSEERLTLFRRTMNQFGFY
EELNQLISMLKRGLVEPEHLLRLSEQAQHRALKLQDLSIIYEGFLKMTEGKSLHTEDYFN
VMLQIIPETDLTDVRVYVDGFNEFSEQELAVLVALAEKVDVDVLLTIDPVFLYRLNPLFG
PTQRTLMRFKELLAERQIPSRDELYDTVYRYTHPSLRYLEATFDQLTAEPYTGSENRIDL
HAAVDRTVEVEAAVREVIRLTREEGYRYRDIALVSRSLDEYGDLASQALQKMGLPYFLDE
RQPMLDHPLVELLKATIEIALRGYREESVFRALKTELVVLDPVHRRTSVDRLEAFVIERG
IKHYHWHDEWQLRRRSGEEARLTSEELDIEAELNQSRERVIETFDPLLTDLKQAKTMQAY
THAMYAFLERVGVSDCLTHWRDEAIEEAELLEAREHTQVWDAVLHLLEQLEAAAPEETLS
TDLFLQMMDTGLDSLRYALIPPSLDQLTITDYVRGRLIDKKVVFLLGANEDQIPLVTTQS
KLLTDQDLDFMHENGLRAGKATEHLFDDETYYLYKAVTAPSERLYISYALVDRTGKAVQP
ARFIADLKARLHQNVIKTHFAEAGEHRPRDQFAFLTNVNQTAAVTALELQRLSRHYPIQD
MWFAVYNELLKHPDGRERLQLLTSALFYQNIPESLDDRVAKSLYTPSIRASVSRLETFQA
CPFKHFASYGLRLKERRLYRLEAPDIGNLYHRTIEHMSQTVKMEGKEWRDVTPDECSNLA
EQAVELVTPEIQHAILMSSNRYAYLKKKLTDVVSKTAEVLIEQSKRDGFDPEAFELAFGS
GQFPPVSFTLSNGATCELIGRIDRVDTAMVHDQLYVRIVDYKSSKREVDFAEIYYGLAMQ
MLIYLKVLIEQAEVWTKENVAPAAALYFHVHRPLVPPAGSEEETRQKVLESYQMQGLLVD
DPEILEMMDRSAKGTSKKSIVIPVKYKKDGTPDANTLKKIVTPPQLEQLMDHAFDVVKAS
AEEMYKGKIDVEPYEYKERRPCQTCPYQSVCHFDEALSNAPRKLKKLEKEEVFQELGGDD
REMDE
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgacctttcacgttggtcgatcggggacgggaaaaagtgaacaaatgatccat
gaggtcattcaagaactgaaacaaaatccgagcggaccgacgatttatatgattgtaccg
gaccaaatgtcgtttgagatggaaaagaaaatggcgacagtcgatggtttgcatggctcg
acgcgcattcaagtcctttcgatgcgccgtctcgcctttttgatgatgcgggatgccggc
gtagcgacagatcaattcttagaccagacggggacccatttgttgttacggagggtcgtc
gagatgagcgaagaacgattaaccttgttccgccgtacgatgaatcagttcggattttat
gaagaattgaaccaattgatctcgatgttgaagcgagggcttgttgaaccggaacattta
ttacggttaagcgaacaggcgcagcaccgtgctctgaagctacaagacctttccatcatc
tatgaaggatttttaaagatgacggaaggcaagtcactccatacagaagactatttcaac
gtcatgttgcaaatcattccggagacagatttgacggatgtacgtgtctatgtggacgga
ttcaacgagttttcagagcaggagttggcggtgctcgtcgcactcgcagagaaggtcgat
gtcgatgtgttgctgacaatcgatcctgtcttcttgtatcgcctcaatccattgtttgga
ccgacgcagcggacgctcatgcgtttcaaagaactgttggcagaacggcagattccttct
cgagacgagctgtatgataccgtctatcgttacacgcatccgagtctccgttaccttgag
gccacattcgaccaattgacggcggaaccttacactggttcagagaaccggattgattta
catgccgcagtcgaccggaccgtcgaggtggaggcggcggttcgagaagtcatccgtctg
acacgtgaagaagggtatcgttatcgggatattgcgctcgtgtcacgctcactcgatgaa
tatggtgatttggcatctcaggcgctccaaaagatgggactgccatacttccttgatgaa
cggcaaccgatgcttgaccatccgctcgtcgaactgttgaaagcgacgattgagattgct
ttacgtggataccgagaagagtccgtgttccgtgccctgaaaacagaactcgtcgtcctt
gatccggtgcatcgtcgtacgtcggttgaccggcttgaagcgttcgtcatcgagcgggga
atcaaacattaccattggcatgacgaatggcaattgcgccgtcgttccggggaagaagcg
cgactcacgagcgaagaactcgatattgaggctgagctgaatcaatcgcgggagcgtgtc
atcgaaacgttcgatccgttgctaacggatttgaaacaggcgaagacgatgcaggcttat
acgcacgccatgtatgcctttttagagcgtgtcggtgtatcagactgtttgacgcactgg
cgtgatgaggcgattgaagaggcggaactactcgaagcgcgtgagcatactcaagtatgg
gacgcggtcttgcacttgctcgaacagttagaggccgcagctccggaagagacgttgtcg
acggacttgttcctacagatgatggacaccgggctagatagtcttcgttatgcgctcatt
ccaccttcgcttgatcaattgacgataacggattatgtgcgtggtcgattgattgataag
aaagttgtcttcctgctcggggcgaatgaagatcaaattcctcttgtcacgacccagtcg
aaactgttgaccgatcaagatttggatttcatgcatgagaatggacttcgtgccggcaag
gcgacagagcatttgttcgatgatgaaacatattacttatacaaagctgtgacagcgccg
agcgagcggctatacattagctatgccctagtagacagaacggggaaagccgttcaaccg
gcgcgctttatcgctgacttgaaggcgcgacttcaccaaaatgtcatcaagactcatttt
gctgaagcaggtgagcaccgaccgcgtgatcaattcgccttcttgacgaatgtgaatcag
acggcggcggtaacggcacttgaacttcagcggttgagtcgtcattatccgattcaagat
atgtggtttgctgtctacaatgaactgttgaagcatccagatggacgggaacgtctccag
ttgttgacgagcgccctcttctatcaaaacatcccggaatcgttggacgatcgtgtcgca
aaatcgctttatactccgtcgattcgggcgagtgtctcccgccttgagacgttccaagcc
tgtccgttcaaacatttcgcaagttatggcttgcgtctgaaggaacgacgattataccgg
ctcgaggctccggatatcgggaatctataccaccgtaccatcgaacatatgtcgcagacg
gtgaagatggaaggaaaggaatggcgagatgtcaccccggacgagtgttccaatttagcg
gagcaggcggtcgaactcgtgaccccagagattcagcatgccatcttgatgagttcgaat
cgttacgcctacttaaagaaaaaattgacggacgtcgtcagtaagacggcagaagtgttg
attgaacaatcaaaacgagacggctttgacccggaagcgtttgaactcgcgttcggcagc
ggacaatttccacccgtttcgttcactttatcgaacggggcgacctgtgaactgatcggt
cgaatcgaccgtgtggacactgcgatggtccacgaccagctatacgtccgaatcgtcgac
tataagtcgagtaaacgtgaagtcgactttgcagaaatttattacggtctggcgatgcag
atgctcatctatttgaaggtattgattgagcaggcagaggtgtggacaaaagagaacgtg
gcacctgctgcggcgctctatttccacgtgcaccgaccactcgttccacctgctggttct
gaagaagagacgcgtcaaaaagtattggagtcataccagatgcaagggctattagtagat
gacccggaaattttagagatgatggaccgctcggcgaaaggcacatctaaaaaatcgatt
gtcatcccggtcaaatataaaaaagatggaactcctgacgccaacaccttgaagaagatt
gtgacccctcctcagctcgaacagttgatggatcatgcgttcgacgtcgttaaagcgagt
gccgaggagatgtacaaaggaaaaattgacgttgaaccttatgaatataaagaacggcgc
ccatgtcagacgtgtccgtatcagagtgtctgtcattttgacgaagcgctctcgaatgcg
ccacgtaaattgaagaagcttgagaaagaagaggtatttcaggagttaggaggcgatgac
cgtgaaatggacgaatga
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integrated database retrieval system
