Exiguobacterium profundum: OE059_11330
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Entry
OE059_11330 CDS
T08917
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
epf
Exiguobacterium profundum
Brite
KEGG Orthology (KO) [BR:
epf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epf03019
]
OE059_11330
Messenger RNA biogenesis [BR:
epf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OE059_11330
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
NleE
Motif
Other DBs
NCBI-ProteinID:
WED54638
UniProt:
A0ABY8B0D8
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All DBs
Position
complement(2173273..2174232)
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AA seq
319 aa
AA seq
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MKVLNKREVLSLTTKIGQLKVGDTLDQYVMIKQSYKGLAGNGKPYLTLILCDESGEIETK
LWDSADTEKYATKKIVHAAGEVMDYRGRTQLKLKQISIIEQEVDIAPYVRSAPIPKSELE
TTIRGFITSLQHDEIRRLVEEVVNRHEEAYFTYPAAVRHHHAVYSGLAFHVMSMLKLADT
MCELYPSLNRDLLIAGVILHDLAKVIELSDAITPEYTLEGKLLGHLSLMASELEVVSREL
GTDREVTTLLQHLVLSHHGKPEWGSANTPQLPEAEMLFFIDNIDARMNMFEKAYEGVEPG
TFTERVMALDNRAFYRPNL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtactgaacaagagagaggtgctttcattgacgacaaaaatcggtcagctcaaa
gtgggcgacacgctagaccaatatgtcatgatcaaacaatcgtataagggacttgccggg
aacggaaaaccttatttaacattaatcctttgcgacgagagtggtgaaatcgaaacgaaa
ttatgggatagtgccgatactgagaagtatgcgacgaaaaaaatcgtccatgcggccggt
gaagtgatggactatcgcgggcgcacccagttgaaactaaaacaaatttcgatcatcgag
caggaagtggatatcgcaccgtacgtccgctcagctcccattccgaagtcagagctcgag
acgacgattcgtggattcattacgtcacttcaacacgatgagattcgccgtcttgtcgag
gaagtcgtcaatcgtcacgaagaggcatactttacgtacccggctgccgttcgacatcat
catgcggtctattcaggactagcatttcatgtgatgtcgatgttgaagctcgcggatacg
atgtgtgaactgtatccatccttgaatcgtgatcttttgattgcaggtgtcattttgcat
gatttagcgaaagtcatcgaattgtctgatgcgattacgccagaatacacacttgaagga
aaattactcggtcatttgtcactcatggcatcggagcttgaagtcgtgtcacgggaactg
ggaacggaccgtgaagtgacgacactgttgcaacatctcgtcttaagccatcacgggaag
ccggaatggggatctgcgaatacgccacagttgcctgaagcggagatgttattctttatt
gataacattgatgcgcgcatgaatatgtttgaaaaagcgtatgaaggggtcgagccgggg
acattcacggagcgtgtcatggcactcgataaccgtgccttctatcgcccgaatctataa
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