Erwinia pyri: Q3V30_02720
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Entry
Q3V30_02720 CDS
T10311
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
epi Erwinia pyri
Pathway
epi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q3V30_02720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epi03019
]
Q3V30_02720
03009 Ribosome biogenesis [BR:
epi03009
]
Q3V30_02720
Enzymes [BR:
epi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Q3V30_02720
Messenger RNA biogenesis [BR:
epi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q3V30_02720
Ribosome biogenesis [BR:
epi03009
]
Prokaryotic type
rRNA helicases
Q3V30_02720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WLS79448
UniProt:
A0AA50HR45
LinkDB
All DBs
Position
566069..568006
Genome browser
AA seq
645 aa
AA seq
DB search
MTDIETTIETTFADLGLSADLLESLNGMGYVKPSPIQMECIPHLLAGRDVLGMAQTGSGK
TAAFSLPLLNNIDSSLKAPQIMVLAPTRELAVQVGEAITEFAKHMKGLNVVALYGGQRYD
VQLRALRQGPQVVVGTPGRLLDHLKRGTLDLSNLRGLVLDEADEMLRMGFIEDVETIMAQ
IPEGHQTALFSATMPEAIRRITKRFMKDPQEVRIQSSMTTRPDISQSYWTAFGRKTDALT
RFLEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLD
ILIATDVAARGLDVERISLVVNFDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLL
RNIERTMKLTIPEVELPNAALLGERRLAKFAAKVQQQLESSDLEQYRALLSKMQPAEDEL
DIETLAAALLKMAQGERPLIVPADAPQRPRREFKERDDRRGDRPDRGPREPRSEAAGDRP
RRERRDVGDMEVYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIELPKG
MPGDILTHFTRTRILNKPMNMQLIGDAVPRSNERSGGGERRAAPGGRGGFGGGNRDGAAR
PEGGRRFSNDRNGGGERRSGSFSRDGGNSRGPRPEGSAPPRRRDA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgactgatattgaaaccactattgaaaccacttttgctgacctgggcctgagcgccgat
ctcctcgaatcactgaacggtatgggctacgtgaagccttccccaatccagatggagtgt
attccacacctgctggcgggccgtgatgttctgggtatggctcagacaggaagcggaaaa
actgcagcgttctcgctgccactgctgaacaacattgatagctccctgaaagcacctcag
attatggtgctggcaccaacccgtgagttggcggttcaggtaggcgaagctataaccgaa
tttgctaaacatatgaaaggccttaacgtggtcgccctttacggcggacagcgttatgac
gtacagctgcgcgctctgcgtcagggaccacaagttgttgtgggtacacctggtcgtctg
ttggatcacctgaaacgcggcacgttagatctctctaacctgcgcggcctggtgctggac
gaagccgatgaaatgctgcgtatgggcttcatcgaagacgttgaaactatcatggcgcag
atcccagagggtcatcagaccgcactgttctctgcaaccatgccagaagcgattcgtcgt
attaccaaacgctttatgaaagatccgcaggaagtgcgtatccagtcaagcatgactacc
cgtccggacatcagccagagctactggactgcgtttggtcgtaagactgatgcactgact
cgcttcctggaagcggaagactttgatgcggctatcatcttcgtgcgtaccaaaaacgcc
acgctggaagttgctgaagcgcttgagcgcagcggttacaacagcgccgcgctgaatggt
gacatgaaccaggccctgcgtgagcagactctggagcgcctgaaagatggtcgtctggat
atcctgattgctaccgacgttgcggcccgtggcctggacgttgagcgcatcagcctggtg
gttaacttcgacatccctatggatgcggagtcttacgttcaccgtatcggccgtaccggt
cgtgcaggtcgtgccggccgtgctctgctgttcgttgagaaccgcgagcgtcgtctgctg
cgcaacattgaacgcaccatgaagctgactattccagaagttgaactgcctaacgcagca
ctgctgggtgagcgtcgtctggctaagttcgcggctaaagtacagcagcagctggaaagc
agcgatctggaacagtaccgcgcgctgctgagcaaaatgcagcctgcagaagatgagctg
gatatcgaaacgctggccgccgctctgctgaaaatggctcagggtgaacgtcctctgatc
gttcctgctgatgcgccacagcgtccgcgccgtgagttcaaagagcgtgatgaccgtcgt
ggcgatcgtccggaccgcggtccgcgtgaaccacgtagcgaagcggcaggggatcgtcct
cgtcgtgagcgtcgtgacgttggcgatatggaagtttaccgcattgaagtgggtcgcgat
gacggcgttgaagttcgtcacatcgtgggcgcgattgctaacgaaggtgatatcagcagc
cgttacatcggtaacatcaagctgttcggtacacattccaccatcgagctgccgaaaggc
atgccgggtgacattctgacgcatttcactcgtacccgtattctgaacaaaccgatgaat
atgcagctgattggcgatgcagtgccaagaagcaacgagcgtagcggtggcggtgagcgt
cgtgcagcccctggcggacgtggtggctttggtggcggtaaccgtgatggtgcagcccgt
cctgaaggtggtcgtcgcttcagcaacgatcgcaacggcggcggtgagcgtcgtagcggt
agcttcagccgtgacggtggcaacagccgcggtccacgtcctgaaggttctgcaccccca
cgtcgtcgtgatgcataa
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