Erwinia pyri: Q3V30_02995
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Entry
Q3V30_02995 CDS
T10311
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
epi Erwinia pyri
Brite
KEGG Orthology (KO) [BR:
epi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
epi03000
]
Q3V30_02995 (rtcR)
Transcription factors [BR:
epi03000
]
Prokaryotic type
Other transcription factors
Others
Q3V30_02995 (rtcR)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
AAA_5
Mg_chelatase
AAA
AAA_16
AAA_22
AAA_19
NACHT
AAA_30
MCM
AAA_14
AAA_2
T2SSE
AAA_7
GYF
AAA_33
ABC_tran
AAA_25
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WLS79496
UniProt:
A0AA50DK90
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Position
complement(629494..631074)
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AA seq
526 aa
AA seq
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MKANVVIGVLGTVLDKRGKRANRWSKWRPTVALCQQEGLQIDRLELLHQPRDVSMAQQVA
EDITQASPSTKVVLHSVKLEDPWDFEEVYGSFLDFVSRYPFNTDAEEYLVHITTGTHVAQ
ICWFLLTEARYLPARILQTSPASKGSETPTALGHYSIIDLDLNRYATLTSRFQREQQHST
SFLKSGIETRNPTFNSLIEQIERVALRSDAPMLLTGPTGAGKSFLAERIYQLRHARHRLA
GKFVAVNCATLRGDNAMSTLFGHVKGAFTGAQQARGGLLREADGGMLFLDEIAELGLDEQ
AMLLRAIEEKRFFPYGADKEVSSDFQLIAGTHRDMQQWVAEGRFREDLFARINMWTFQLP
GLAERREDIEPNLDFELARYAREQQTQVRFDKKARSHFLRFACSTEASWRGNFRELGASV
TRMATLAEQGRISQELAEEEIARLRASWRTTAPQATLTDLPSAQYDLFDECQLQTVLSVC
RAADSLSEAGRRLFAVSRQGKKQPNDADRLRKYLARFGLNWEKVKG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctaacgtagtgatcggcgtgctgggcacggtgctggataaacgcggcaagcgc
gcaaaccgctggagtaaatggcggccaaccgtcgcactttgccagcaggaaggcttacag
atcgacaggctggagctgctgcatcaaccgcgtgatgtcagtatggcgcagcaggtggcg
gaagatatcacccaggcgtcgccctccaccaaagtggtgctgcacagcgttaagctggaa
gatccctgggactttgaagaggtctacggcagcttcctcgattttgtcagccgctatcct
tttaataccgacgccgaagagtatctggtgcatatcactaccggcacgcacgtggcgcaa
atctgctggtttttgctgaccgaagcccgctatctgcccgcgcgcattttgcagacctcg
ccggccagcaagggctcggagacaccaaccgcgctcggccactattccattatcgatctc
gatctgaaccgatacgccacgctgaccagccgctttcagcgcgaacagcagcactccacc
tcgtttttaaaatccggcatcgagacgcgcaaccccacttttaacagcctgatcgagcag
attgaacgcgtggcgctgcgctcggacgccccgatgctgctgaccggcccaaccggcgcg
ggcaaatctttccttgcggagcgcatctatcagctgcgccatgcccgccaccggctggcc
ggtaaattcgtggcggttaactgtgctacgctgcgcggcgacaacgcgatgtccacgctg
tttggccacgttaagggcgcctttaccggcgcacagcaggcgcgcggcgggctgctgcgg
gaagccgacggcggcatgctgtttctggacgagatagcggagctggggctggatgagcaa
gcgatgctgctgcgcgccatcgaggagaaacgcttcttcccttatggcgctgataaagag
gtcagcagcgattttcagctgatcgccggcacgcaccgggatatgcagcagtgggttgcc
gaaggccgctttcgcgaagatctgtttgcccgcatcaatatgtggacgtttcaactgcct
ggactggccgaacgccgcgaagatatcgaacccaatctggattttgagctggcgcgttac
gcccgggaacagcagacccaggtgcgctttgataaaaaagcgagaagccattttctgcga
ttcgcctgctcgacagaagccagctggcgaggcaatttccgcgagctgggcgcttccgtc
acgcggatggcaacactggcggaacagggaaggatttcgcaggaactggcggaagaagag
atcgcccggctgcgcgccagctggcgcactacggcaccgcaggccactcttaccgatctt
ccttcagcccagtacgatctgtttgacgagtgtcaactacagacggtgctgagcgtctgc
cgcgcggcggattcgctttccgaagcgggccggcgcctgtttgccgtctcccgtcagggg
aaaaaacagcccaacgatgccgatcgcctgcgtaagtatctggctcggtttgggctgaac
tgggagaaggttaaagggtaa
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