Erwinia pyri: Q3V30_04280
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Entry
Q3V30_04280 CDS
T10311
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
epi Erwinia pyri
Pathway
epi03410
Base excision repair
epi03430
Mismatch repair
epi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
epi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q3V30_04280 (recJ)
03430 Mismatch repair
Q3V30_04280 (recJ)
03440 Homologous recombination
Q3V30_04280 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epi03400
]
Q3V30_04280 (recJ)
DNA repair and recombination proteins [BR:
epi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Q3V30_04280 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Q3V30_04280 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Q3V30_04280 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF4180
Motif
Other DBs
NCBI-ProteinID:
WLS79732
UniProt:
A0AA50HNX6
LinkDB
All DBs
Position
898075..899793
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AA seq
572 aa
AA seq
DB search
MKSQTELRRRVAVEGAELPDELHPLLRRLYQHRGVLQASELERGAKNLHPFHSLSGIELA
AEILQKAIADNLCIMIVGDFDADGATSTALAVLALRSMGGRNVKYLVPNRFDDGYGLSPE
VVEQAAARGAQLIVTVDNGISSHAGVALAHEKGIAVVVTDHHLPGETLPDAEAIVNPNLE
ESAFPSRSLAGVGVAFYLMLALRARLRDSGAEVLPNLAELLDLVALGTVADVVPLDANNR
ILVWQGLSRIRAGKCRAGIKALLEIANRDPRQLAASDLGFAIGPRLNAAGRLDDMSVGVA
LLLSEDIAQARMLASELDALNQTRKEIEQGMQREALALCDALERSSEALPLGIAMYHPEW
HQGVVGILASRLKERFHRPVIAFAPAGDGTLKGSGRSVSGLHMRDALERLDTLHPGLIIK
FGGHAMAAGLSLEEAKFAEFRQHFGDLVGEWLDKEALQGVVWSDGELMAQELTLPTAELL
REAGPWGQAFPEPQFDGKFKLIQQRLVGERHLKVMIEPLGGGPLLDGIAFNVDTALWPDP
SVKQVELAYKLDINEFRGNRSVQLIIEKLWPL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagtcaaactgaactccgccgtcgtgtggcggtggaaggggccgagctccccgac
gaactccatccgctgctgcgtcgtctttatcagcatcgtggggttctgcaagccagcgag
ctggagcgcggggcgaaaaacctgcatccttttcactcgctgtcgggcattgagttagcg
gctgagatcctgcaaaaagcgattgcggataacctctgcatcatgatcgtgggggacttt
gacgccgacggcgctaccagcaccgcgctggccgtgcttgcgctgcgcagcatgggcgga
cgcaacgtcaaatatctggtgcctaaccgctttgatgatggctatggcctgagtcctgaa
gtggttgagcaggctgccgcccgaggcgcgcagctgattgtgaccgtggataacggcatc
tcctctcatgctggcgtggcgctggcgcacgagaagggcattgccgtggtggtcaccgat
caccaccttcccggcgaaacgctgccggatgcggaagcgatcgtaaaccccaatctggaa
gagtccgccttcccgtcacgctcgctggcgggcgtgggcgtggcattctatctgatgctg
gcgctgcgtgcgcggctgcgtgacagcggggcagaagtgttgcctaacctggcggaactg
ctggatctggtggcgctgggcacggtggcggacgtggtgccgctggatgccaataaccgc
attctggtctggcaggggctgagccgcattcgtgccggaaaatgccgggctggcattaaa
gcgctgctggaaatcgctaaccgcgatccccgtcagctggccgccagtgatttaggcttt
gcgattggcccacggctgaatgcagcgggcaggctggacgatatgtctgttggcgtggcg
ctgctgctgagcgaagatattgctcaggcccgcatgctggcgagtgaactggatgcgctg
aaccagacccgtaaagagattgagcagggcatgcagcgggaagcgctggcgctgtgtgac
gcgctggagcgcagcagcgaagcgttgccgctggggattgcgatgtaccatcccgagtgg
catcagggcgtggtcggtatccttgcttcccgcctgaaagagcgttttcaccggccggtt
atcgccttcgcaccggcgggcgacggcacgctgaaaggctccgggcgctctgtctccggg
ctgcatatgcgtgatgcgctggagcggctggatacgctccatcccggcctgattattaaa
tttggcggtcacgccatggccgctggcctgtcgcttgaagaggcgaaatttgccgagttc
cgccagcacttcggcgatctggtcggtgaatggctggacaaagaagcgctgcagggcgtg
gtttggtcagacggcgagctgatggctcaggagctgaccttgccaacggcggaactgctg
cgcgaggcgggaccgtggggccaggctttcccggaaccgcagtttgacggcaaatttaag
cttatccagcagcggctggtaggcgagcgccatctgaaagtgatgatcgaaccgctgggc
ggcggcccgctgctggatggcatcgcctttaacgtggatactgcgctgtggccagacccc
agcgtgaagcaggttgagctggcctataagctcgacatcaatgagtttcgcggcaaccgc
agcgtccagctgattattgaaaagctctggccactgtag
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