Erwinia pyri: Q3V30_04475
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Entry
Q3V30_04475 CDS
T10311
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
epi Erwinia pyri
Pathway
epi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
epi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Q3V30_04475 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epi03400
]
Q3V30_04475 (recB)
Enzymes [BR:
epi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Q3V30_04475 (recB)
DNA repair and recombination proteins [BR:
epi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Q3V30_04475 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WLS79769
UniProt:
A0AA50DKN0
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All DBs
Position
950126..953671
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AA seq
1181 aa
AA seq
DB search
MTQLAQRLDPLTLPLQGERLIEASAGTGKTFTIGLLYLRLLLGLGGGSAYSRPLSVEEIL
VVTFTEAATAELRGRIRENIHALRIACIRGNTSDTMLAQLLEQIPNLTQAAALLLAAERQ
MDDAGIFTIHGFCQRMLNLNAFESGMLFEQQLIEDELPLRRQAIADFWRRHCYPLPLAIT
RVMAQLWQGPEQLLGTLSPWLNGEALSLKHPPDLEETFTERHEKIIARINQLKAAWVAAG
DLHDLIAKSGVDKRSYSSKHLPNWLEKLSQWAAEETQDYSFPKELERFGQRILLEKTKKG
EAPAHPLFDDIDRFLAEPLSLRELVIARALSEVRFVTQKEKTLRALLGFDDLLSRLDNAL
QQPAGEALAQAIRTRYPVALIDEFQDTDPQQYRIFRTIYGKQPEHALLLIGDPKQAIYAF
RGADIFTYMKARNEVSAHYTLETNWRSSLAMVNSVNHLFSQLENPFLFNDIPFIKVQPAE
ANAALSFTLEGQQQPALRFWLQPGDGVGVSDYQQFMARQCAAEICRWLTAGQQGKALIGK
AEKCRPVQASDITILVRSRNEASVMREALNGLNIPSVYLSNRDSVFTTPEAREMLWLLQA
VLAPEQERALRSALATSIFGLDALTLDALNQDERAWDALVDEFDRYRQRWLKRGVLPMLR
DLMVNRSIAENLLASESGERRLTDFLHLGELLQEASAQLDSEHALVRWLAQEIAQPNGQS
ASQQLRLESDRHLVQIVTIHKSKGLQYPLVWLPFVANYREASQGIYHDRQNFQALLDLRD
EEESVELAEQERLAEDLRLLYVALTRSIWHCSVGIAPLVKGNRKKEGNTDLHHSALGFLV
QKGEAADASQLLSHLQALQNEATEVVLAGTPESTPWQVVRESEQTLTSQQITRALRDEWR
VTSYSGLQQHGHAMTLDLLPRLDVDAAGESQPQQMSELTPHTFPRGAAPGTFLHGLFEDL
DFTQPINDEWLAEQLLGQGHDPAWLPVMKQWLERILQTPLDDSGVSLSQLPTDKRQVELQ
FYLPIQRMLTAEALDRLIRRYDPLSAECPPLNFQQVQGMLKGFIDLVFLWQGKYYLLDYK
SNWLGASAEDYTPQAMAQAMQSHRYDLQYQLYCLALHRYLRHRLADYDYQHHFGGVFYLF
LRGVDGTASENGIYRTRPDAAFIAELDALFAGKEQEDACQG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcttgcccaacgtcttgatcccctgacgctgcctttgcagggcgaacggctt
atcgaggcctcggcaggaacgggtaagacctttactattggcctgctttatctgcgtctg
ttgttagggctggggggcggctcggcttactcgcgtcctctgtcagtagaagaaattctg
gtggttacctttaccgaggcggcaacagcagagctgcgcggccgtatccgggagaatatc
catgccttacgcatcgcctgcatcaggggcaatacctctgacaccatgctggcgcagctg
ctggagcagatccccaatctgacgcaggcggcagccctgctgctggcggcggagcggcag
atggatgatgccgggattttcactatccacggcttttgccagcggatgctgaacctcaat
gcctttgagtccggcatgctgtttgagcagcagctgattgaggatgaactgccgctgcgt
cgccaggctatcgctgatttctggcggcgtcactgctatcccctgccgcttgccattact
cgcgtgatggcgcaactgtggcaggggccggaacagctccttggcacgctgtcgccctgg
ctgaacggcgaggcgctttcgctgaagcatccacctgatttggaagaaactttcaccgag
cggcatgagaagatcatcgccaggatcaatcagcttaaagccgcctgggttgctgccggc
gatctgcacgacctgattgcaaagtccggcgtggacaagcgcagctacagcagtaagcac
ttacctaactggctggaaaagctctcgcagtgggcggcggaagagacgcaggattacagc
ttcccgaaagagctggaacgctttggtcagcgcatactgctggagaaaacaaaaaaaggg
gaagccccggcccatccgctgtttgatgatatcgatcgctttctggctgaaccgctctcc
ctgcgcgaactggttattgcccgtgcgctgagcgaagtgcgttttgtgacgcagaaagag
aagacgctgcgtgcgttgctggggtttgacgacctgctcagcagactcgataacgcgctg
caacagcccgctggcgaagcgctggctcaggcgatccgcacgcgctatccggttgcgcta
atcgatgaatttcaggataccgacccgcagcagtatcgcatcttccgcacgatttatggc
aagcagcccgagcatgcgctgttactgataggcgacccgaagcaggctatctatgcgttt
cgcggcgccgatatcttcacctatatgaaagcgcgtaatgaagtcagcgcccactatacc
cttgaaaccaactggcgctcctctctggcgatggttaacagcgttaatcacctgttctcg
cagctggaaaacccttttctgtttaacgacattccctttattaaggtgcagcccgcagag
gcgaacgccgcgctgagctttacgctggaaggccagcagcagcccgcgctgcgtttctgg
ctgcagccgggggatggcgtaggggtaagtgattaccaacagtttatggcgcgccagtgt
gccgccgagatttgtcgctggctgaccgcaggccagcagggcaaagcgctgattggtaaa
gcagagaagtgccgtccggtacaggcatcggatatcactatcctggttcgtagccggaac
gaagcctcggtgatgcgcgaagcgctgaacggcctcaacatcccttccgtctatctttct
aaccgcgacagcgtattcactaccccggaagcccgcgaaatgctctggctgctacaggca
gtgctggcgccggagcaggaaagggcgctgcgcagcgcgctggcaaccagcatctttggc
ctggacgcgctgacactggatgcgctgaatcaggatgaacgcgcctgggatgcgctggtg
gatgaatttgaccgctaccgtcagcgctggctgaagcgcggcgtgctgccgatgctgcgc
gatctgatggtcaaccggtcgatagcagagaatctgctcgcctcggagagcggtgaacga
cggctgaccgatttcctgcatctgggggaactgttacaggaagcctctgctcagttggac
agtgagcatgcgctggtccgctggctggcgcaggagatcgctcagcccaacgggcagtcc
gccagccagcagctgcggctggagagcgatcgtcatcttgtgcagatcgtcaccatccat
aaatccaaagggctgcaatatccgctggtctggcttccttttgtggccaactaccgcgag
gcaagccaggggatttaccatgaccggcaaaattttcaggcgctgcttgatctgcgggat
gaggaggagagcgtggagctggccgagcaggagcggctggcggaggatctgcgcctgctc
tatgtggcgctgacgcgctccatctggcactgcagcgtgggtattgcgcccctggttaaa
gggaatcgtaagaaagagggcaataccgacctgcaccacagcgcgctcggctttctggtg
cagaaaggggaagcggcagatgccagccagctgctcagccatctgcaggcattacaaaat
gaggcgacagaggtcgtgcttgccggtacgccagagagtacgccctggcaggtggtcaga
gagagtgagcaaacgcttaccagccagcaaattacccgtgcgctgcgcgacgaatggcga
gtcaccagctattcgggactgcagcagcatgggcatgccatgaccctggatctgcttccc
cggctggatgtggatgcggcgggcgaaagccagccgcagcagatgagtgaactgacgccg
cacaccttcccgcgcggtgccgcgccggggaccttcctgcatggcctttttgaggatctg
gactttacgcagccgatcaacgatgagtggttagcagaacagctgctgggacagggccac
gatcctgcctggctgccggtgatgaagcagtggctggaacgcattctgcaaacgcctctg
gatgactctggcgtcagcctcagccagttgccaaccgacaaacgccaggtggagttacaa
ttctacctgcctatccagcggatgctgacggctgaggcgcttgaccggctgatccgccgt
tacgatcccctctctgccgaatgcccgccgctgaattttcagcaggttcagggtatgctg
aagggttttatcgacctcgtatttctctggcagggaaaatattacctgctggattataaa
tctaactggctgggtgcctctgctgaagattacaccccgcaggcgatggctcaggcgatg
cagtcgcatcgttatgacctgcagtatcagctttactgcctggctctgcatcgctatctc
cgtcaccggctggcggattatgactatcagcaccattttggcggcgtgttctatctcttc
ctgcggggagttgacggtacggcgagtgaaaatggtatttaccgaacccgtccggacgct
gcgtttattgcagagctggacgcgctgtttgcaggaaaagagcaggaggacgcatgtcag
ggataa
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