Erwinia pyri: Q3V30_06960
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Entry
Q3V30_06960 CDS
T10311
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
epi Erwinia pyri
Brite
KEGG Orthology (KO) [BR:
epi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epi03400
]
Q3V30_06960
DNA repair and recombination proteins [BR:
epi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
Q3V30_06960
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
AAA_16
AAA_22
SLFN-g3_helicase
Zn_Ribbon_1
DUF7577
zf-tcix
TniB
TPP_enzyme_N
AAA
Motif
Other DBs
NCBI-ProteinID:
WLS80213
UniProt:
A0AA50HRY6
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All DBs
Position
complement(1496160..1497914)
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AA seq
584 aa
AA seq
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MSFTLRPYQQEAVDATLSYFRRSHQPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHSKYQAYGLEADIFAAGLQRKESRSKVVFGSVQSVARNLAQFDGEFTLLIVDECH
RISDADDSQYQQILAHLRQSNPQLRLLGLTATPYRLGKGWIYQFHYHGMVRGDERALFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTANENGLFSEADLNRELKQQQRITPH
IVQQIVEFAQDREGVMIFASTVDHAREVLGLLPGSKALISAGTPGAERDALITAFKAREI
RYMVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKNDCLILDYAGNPH
DIFTPEVGSPKGKSDNKPVQVFCPACGFANTFWGKTTADGTIIEHFGRRCQGVLEDDEGE
REQCDFRFRFKSCPHCNAENDIAARRCHECDAVLVDPDDMLKAALKLKDALVLRCAAMVL
ECGQDEKGEWLKARYYDEEATEVSERFRLSTPAQRTAFEQIFLRPHQRAPGVPLGWKNAA
DIVALQPLLRQPDFVVARKQRHYWQIREKMFDYQGRYRRANELR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttacgctacgtccctatcagcaggaagcggttgatgccacgctcagctacttt
cgtcgctcccaccagcccgccgtcatcgtgctgcctaccggcgcgggcaaaagcctggtg
attgccgagctggcccggctggcccgcggacgggtgctggtgctggctcatgtcaaagag
ctggtggcgcagaatcacagcaaatatcaggcttacgggctggaggcggatatcttcgcc
gccggtttgcagcgtaaagagagccgtagcaaggtggtcttcggcagcgtccagtccgtt
gcacgcaatctggcgcagtttgatggcgagtttacgctgctgatcgtggatgaatgtcac
cgtatcagcgatgccgatgatagccagtaccagcaaatcctcgcccatttacgccagagc
aacccccaactgcgtctgctgggcctgactgccaccccctaccgtctgggtaaaggctgg
atttatcagttccattatcacggtatggtcagaggtgacgagcgggcgctgtttcgggac
tgtatctatgaactgccgctgcgctatatgattaagcacggttttctggttcccccggaa
aggctcgacatgccggtagtacagtatgacttcagccgtctgaccgccaatgaaaatggc
ctgttcagcgaggcggacctcaaccgtgagctgaagcaacagcagcgtattaccccgcat
atcgttcagcagattgtcgagttcgcacaggatcgcgagggcgtcatgatctttgcgtca
acggttgatcacgccagggaagtgcttggcctgttgcctggcagtaaagccctgatcagc
gcaggaacgccgggagcagaaagggatgcgttgattaccgcatttaaggcgcgagagatc
cgctatatggtcaacgtggcggtattaactaccgggtttgatgcgccccacgtcgatttg
atcgccattcttcgtcctactgaatcggtcagcctttatcagcagatcgtcgggcgaggt
ttgcgcctttcgccgggaaaaaacgactgcctgatcctcgactatgccggtaatccgcac
gatattttcacccctgaagtcggctctcctaaagggaaaagcgataacaaaccggtgcag
gttttctgtcccgcctgcgggttcgccaataccttctgggggaaaacgaccgcggacggc
accattattgaacattttggccgccgctgtcagggcgtgctggaagatgatgaaggtgaa
agggagcagtgcgacttccgcttccgcttcaaaagttgcccgcactgtaatgctgaaaat
gatattgcggcgcggcgctgtcatgagtgcgacgcggtgctggtggacccggacgatatg
ctgaaggcggcgctaaaactcaaggatgcgctggttctgcgctgtgcggccatggtgctg
gagtgcggccaggatgagaaaggcgagtggctgaaagcgcgttactatgatgaagaagcg
actgaagtgagcgaacgcttccggctcagcacccctgcacaacgtaccgcctttgagcag
atcttcttacgtccgcatcaacgcgcgcccggcgtgccgctgggttggaaaaacgcggcg
gatattgttgctctgcaaccgctgctacgccagcccgattttgtggtcgcccgcaagcag
cgccattactggcagatacgggaaaaaatgttcgattaccagggccgctaccgtcgcgcc
aacgaactgcgctga
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