Erwinia pyri: Q3V30_07560
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Entry
Q3V30_07560 CDS
T10311
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
epi Erwinia pyri
Pathway
epi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
epi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Q3V30_07560 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epi03400
]
Q3V30_07560 (sbcB)
Enzymes [BR:
epi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Q3V30_07560 (sbcB)
DNA repair and recombination proteins [BR:
epi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Q3V30_07560 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Q3V30_07560 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Q3V30_07560 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WLS80330
UniProt:
A0AA50HRT4
LinkDB
All DBs
Position
complement(1639041..1640468)
Genome browser
AA seq
475 aa
AA seq
DB search
MKPNKPEPTFLFHDYETFGKSPSLDRPAQFAGIRTDMDFNIIGEPEVFYCQPADDYLPQP
EAVMITGITPQLAQARGVSEADFTKRIHALFSEPNTCIVGYNNVRFDDEVTRNLLYRNFY
DPYGWSWQNGNSRWDLLDVMRACYALRPEGIEWPENEDGFPSFRLEHLTKANGVAHENAH
DAMSDVYATIAMAKLVKEKQPRLYEFLFAHRNKNKITTLIDIPQMKPLVHVSGMFGAFRG
NTSWIAPLAWHPENKNALITCDLAGDISPLLELDADSLRERLYTRRDELGDNAPVPVKLM
HINKCPVVAPANTLRPEDAERLGIDRQHCLDNLALLRQHPEVREKVVALFAEAEPFKASE
DVDAQLYDGFFSDADRNAMTIIQQTQPENLPALDLTFNDARIEKLLFRFRARNYPGTLDE
AEQKRWLQHRREALNPERVQSYVQELEMLFNQYEGDQAKMSQLKALFDYARELVS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacctaacaagcctgaacctaccttcctcttccacgactacgaaaccttcgggaaa
agtccgtcgctggaccgtcctgcgcagtttgccgggatccgtacggatatggatttcaac
atcattggtgagcctgaggtgttctactgtcagccagcggatgattacctgccgcagcca
gaagcggtgatgattaccgggatcacgccgcagctggcgcaggccagaggggtgagcgag
gcggatttcactaaacgtattcacgcgctgttcagcgaaccgaatacctgcattgtgggc
tacaacaatgtgcggtttgatgacgaagtcacgcgcaacttgctctatcgtaatttttac
gatccctatggctggagctggcagaatggcaacagtcgttgggatttgctggatgtgatg
cgcgcctgttacgcgctgcgccctgaaggaatagagtggccagaaaatgaggatggtttt
cccagcttccgtctggagcatctgaccaaagccaacggcgtggcgcatgaaaatgcccat
gatgcgatgtctgacgtctatgccaccattgcgatggcaaagctggtgaaagagaagcag
ccacggctttatgagttcctgttcgcccatcgcaataaaaacaaaatcaccacgctgatt
gatatcccgcaaatgaagccgttggtgcatgtctctggcatgtttggcgctttccgtggt
aacaccagctggattgcgccgctggcgtggcatcctgagaataaaaatgcgctgataacc
tgtgatctggcgggcgatatctcgcctctgctggagctggatgccgattcactgcgcgaa
cgactttatacccgtcgtgatgagctgggcgataacgcaccggttccggtgaaactgatg
cacattaataaatgcccggttgtagcgcctgcaaatacgcttcgtccggaagatgcagaa
cggttagggatcgatcgccagcactgcctggataacctcgccctgctgcgtcagcatcct
gaagtgcgtgaaaaggtcgtggcgctgtttgccgaagcggagccttttaaagcctctgaa
gacgtcgatgcccagctctatgacggtttctttagcgatgccgatcgtaacgccatgacc
attatccagcagacgcagccggaaaatctgcctgcgttggatctgacctttaacgatgcg
cgcattgaaaagctgttgttccgcttccgcgcccgtaattaccccggcacgctggatgaa
gctgagcaaaaacgttggctgcagcatcggcgggaggcgttaaaccctgagcgggtgcag
agctatgtacaggaactggagatgctgtttaatcagtacgaaggcgaccaggcgaaaatg
agccagctcaaagcgctatttgattatgcgcgggagttggtttcctga
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