Erwinia pyri: Q3V30_10785
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Entry
Q3V30_10785 CDS
T10311
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
epi Erwinia pyri
Brite
Enzymes [BR:
epi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Q3V30_10785 (hrpA)
Messenger RNA biogenesis [BR:
epi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Q3V30_10785 (hrpA)
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GFIT
Other DBs
NCBI-ProteinID:
WLS76988
UniProt:
A0AA50HNL6
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Position
complement(2338292..2342191)
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AA seq
1299 aa
AA seq
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MSITPQSPLATLFPRLDAVMLRDRQRLLKRLHGAKKVSKPAALQAIADELAAEITLAEAR
VAQRRAATPTIRYPENLPVSQKKQDIADAIRDNQVVIVAGETGSGKTTQLPKICLELGRG
ITGLIGHTQPRRLAARTVADRIAEELETSLGGCIGYKVRFNDQVSETTQVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLRELLPRRPDLKVIITSATIDPQRFSKH
FNNAPVIEVSGRTYPVEVRYRPVVEEADDTDRDQLQAIFDAVDELGKESRGDILIFMSGE
REIRDTADALNRRDLAHTEILPLYARLSNAEQNRVFQSHTGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSFRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEEDFINR
PAFTDPEILRTNLASVILQMTALGLGDIGAFPFVEAPDKRNIQDGVKLLEELGAITQSEN
QHYKLTPAGRSLAQLPVDPRLAKMVLEAQRYACTREVMIITAALSIQDPRERPAEKKQAS
DEKHARFADKESDFLSFVNLWDYLQEQQKALSSSQFRRLCKMEYLNYLRVREWQDIYTQL
RQVVREQGIPLNSEPADFRGVHTALLTGLLSHIGQKDADKQEYTGARNARFAIFPGSGLF
KKPPKWTIVAELVETSRLWGRIAARIDPEWIEPVAQHLIKRSYSEPHWEKAQGAVMASEK
VTLYGLPIVAARKVNYSQIDPVLSRELFIRHALVEGDWQTRHAFFRANLKLREEVEELEH
KSRRRDILVDDETLFTFYDRRIPHEVVSARHFDSWWKQASREEPERLNFAKEMLIKEGAN
DVSKLDYPNFWQQGNLKLRLSYQFEPGTDADGVTVHIPLPLLNQVEEGGFEWQIPGLRRE
LIIALIKSLPKPVRRNLVPAPNYAEAFLGRVTPLALPLLEALEREFRRMTGITIDREAWQ
WDQVPDHLKITFRVVDENNRKLNEGRDLAALKLQLKGKVQETLSLVADDGLEQSGLHIWS
FGDLPDHFEQKRGNYSMKAWPALVDEKDSVAIRLFDSQHEQRKAMWRGQRRLLLLNIPSP
IKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCIACGVDKLIAEHGGPSWQEAGFAALHEKV
RAELNDTVVDIAKKVEQILTAVFNINKRLKGRVDMTMALALSDIKAQMSGLVYKGFVTQN
GWKRLSDTLRYLNAIERRLEKLPVDPHSDRARMLKVENIQQAWNTWYNKLPPLRREDEDV
KDVRWMIEELRVSYFAQQLGTPYPVSEKRIQQAMDEIVV
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataacaccgcaatcgccccttgccacgctctttccccgtctggacgccgttatg
ctgcgcgatcgccagcggttgctgaagcgtctgcacggggctaaaaaagtgagtaagcca
gccgccctgcaggctattgctgatgaactggctgcagaaatcaccctggctgaagcgcgg
gtagctcagcgtcgcgccgctacgccgaccattcgctatccggaaaacctgccggtcagc
cagaagaaacaggatattgcggacgccattcgcgataatcaggtggtgattgttgctggt
gaaacaggctcaggtaaaaccactcagctacccaaaatttgtctggaactgggcaggggc
atcaccgggctgattggccacacccagccgcgccgcctggctgcgcgcaccgtggcagac
cgcattgccgaggagctggagaccagccttggtggctgcatcggttataaagtccgtttt
aacgaccaggtgagtgaaaccacccaggtcaagttgatgaccgacggtattctgctggct
gaaattcagcaggaccggctgctgatgcagtacgacaccatcattatcgatgaggcgcac
gaacgcagcctgaatatcgatttcttgctcggttatctgcgggagctgttgccgcgtcgc
cccgatttaaaagtgatcatcacctccgcgaccatcgacccacagcgcttctcgaagcat
ttcaacaatgcaccggtgattgaagtttccggcagaacttatccggttgaggtgcgttac
cgtccggtggtggaagaggctgatgataccgatcgcgatcagctccaggcgatttttgat
gcggtggacgagctgggtaaagagagccgcggcgatattctgatctttatgagcggcgag
cgcgaaattcgcgatacggccgatgcgctcaaccggcgcgatctggctcataccgagatc
ctgccgctctacgcccgtctgtcgaatgccgagcaaaaccgcgtgttccagtcccacacc
ggcaggcgtatcgtgctggcgaccaacgtggcagaaacctcgctgaccgtgccgggcatc
aaatatgttatcgatccgggcacggcgcgtatcagccgctacagcttccgcaccaaggtg
cagcgcctgcctatcgaaccggtttctcaggcttcggctaatcagcgtaaaggccgctgt
ggccgtgtctctgaagggatctgcattcgtctctattcagaagaggatttcatcaatcgt
ccggcgtttaccgacccggaaattctgcgcaccaatctggcctcggtcattctgcaaatg
accgcgctgggtctgggcgatatcggcgcgttcccctttgtggaggcgccagataagcgc
aatattcaggatggcgtcaagctgctggaagagctgggcgccattacccagagtgaaaat
cagcactacaagttaacccccgcgggccgctcgctggcgcagctgccggtggatccccgt
ctggccaaaatggtgctggaagcccagcgctacgcctgtacgcgggaggtgatgatcatc
accgcggcgctctctattcaggacccgcgtgagcggccggcggagaagaagcaggcttct
gatgaaaagcatgcccgctttgcggataaagagtccgatttcctgtcgttcgtaaacctg
tgggactatctgcaagagcagcaaaaggcgctctcctccagccagttccgccgcctctgc
aagatggagtatcttaattatctgcgcgtgcgcgaatggcaggatatctacacccagctg
cgtcaggtcgtgcgtgagcagggcatcccgctaaacagtgagccggcggatttccgcggc
gtgcacacggcgctgcttaccggactcctctcccatatcggccagaaagatgccgataag
caggagtataccggcgcgcgtaatgcccgttttgctattttccccggatccgggctattc
aagaagccgcctaaatggaccattgtggcagaactggtcgagaccagccggttgtggggg
cgcattgccgcccgcatcgacccggaatggattgagccggtcgcccagcatctgattaag
cgcagctacagcgagccacactgggaaaaagcgcagggcgcggtgatggccagtgaaaaa
gtgacgctgtacgggctgcccatcgtggccgcccgcaaggttaattacagccagatcgat
ccggttctgtcccgcgaactgtttattcgccatgcgctggtcgaaggcgactggcagact
cgccacgcctttttccgcgccaacctgaaactgcgtgaggaagtggaggagctggagcat
aagtcccgccgtcgcgatattctggtggatgacgagacgctgtttaccttttacgatcgg
cgtattccgcatgaagttgtctcggcacgccatttcgacagctggtggaagcaggcgagc
cgtgaagagccggagcggctgaatttcgctaaagagatgctgattaaagagggtgctaac
gacgtcagcaagctcgattacccgaacttctggcagcagggcaatcttaaactgcgtctg
agttatcagttcgagccgggaacggatgcggacggagtgacggtacatattccgctgccg
ttgctgaatcaggttgaagagggcggctttgagtggcagatccccggcctgcgccgtgag
ttgattattgccctgatcaaatcgctgccaaaaccggtgcgccgtaatctggtaccagca
cctaactatgctgaagcatttttaggccgcgttacgccgctggcgctgcccctgctggaa
gcgctggagcgcgagttccggcgcatgaccggcatcaccattgatcgggaggcctggcag
tgggatcaggtgcccgatcaccttaaaatcaccttccgggtagtggatgaaaacaaccgc
aagctgaatgaggggcgcgaccttgccgcactcaagctgcagctgaaaggcaaggtgcag
gagacgctgtcgctggtggcggatgacgggctggaacagagcgggctgcatatctggagc
tttggcgatctgcccgaccatttcgagcaaaagcgcggtaattacagcatgaaggcctgg
cctgcgctggtggatgaaaaggatagcgtcgccatccggctgtttgattctcaacacgag
cagaggaaagcgatgtggcgcgggcagcgccgtttgctgctgctgaatatcccgtcgccg
attaaatatctgcatgaaaagctgccgaacaaagccaagctggggctctactttaaccct
tacggcaaggtgctggatctgattgatgactgcatcgcctgcggcgtggataagctgatt
gctgaacatggcggtccaagctggcaggaagcgggttttgcagccctgcacgaaaaagta
cgcgcagagctgaacgatacagtggttgatattgcgaaaaaggtggagcagatcctcact
gcggtcttcaacatcaacaagcgactgaaagggcgcgtggatatgaccatggcgctggcc
ctctctgatatcaaagcgcagatgtccgggctggtctacaaagggtttgtgacccagaac
ggctggaagcgtctttcagatacgctacgttacctgaacgcgattgaacgccgtctggaa
aagctgccggtcgatccgcacagcgatcgtgccagaatgctgaaggtggagaacatacag
caggcgtggaacacctggtacaacaagctgccgccgcttcgccgtgaggatgaagatgtg
aaagatgtccgctggatgattgaggagcttcgcgtcagctacttcgcccagcagcttggt
acgccctatccggtttcagagaagcgtatccagcaggcaatggatgagatcgtagtataa
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