Erwinia pyri: Q3V30_17865
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Entry
Q3V30_17865 CDS
T10311
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
epi Erwinia pyri
Brite
Transcription machinery [BR:
epi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Q3V30_17865 (rapA)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WLS78305
UniProt:
A0AA50HPR5
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Position
3768614..3771520
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AA seq
968 aa
AA seq
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MPFTLGQRWISDTESELGLGTIVAVDTRMVTVLFPATGENRLYARNDSPITRVMFNPGDT
ITSHEGWQLEVEEVTTENGLMTYIGTRLDTQETGVVMREVMLDSKLVFSKPQDRLFAGQL
DRMDRFALRFRARKYQSEQYRLAVSGLRGMRTSLIPHQLHIAHDVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERVLIVVPETLQHQWLVEMLRRFNLRFALFDDERYAQAQL
DSDNAFETEQLVICSLDFVRRNKQRLEMLAEAAWDLLIVDEAHHLAWEEGKPSREYQVIE
QLAEQIPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAAFVEEQQHFRPIADAVTGLL
ADKALSQDELNMLNDLVGEQDIEPLLQTANSDREEKLEARQELISMLMDRHGTSRVLFRN
TRNGVKGFPKRELHEIRLPLPSQYQTAIKVSGIMSARKTVDERARDMLYPEQIYQEFEGD
SGTWWNFDPRVEWLMGFLTSHREHKVLVICAKAATALQLEQVLREREGIRAAVFHEGLSI
IERDRAAAWFASEEEGAQVLLCSEIGSEGRNFQFANQMVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVQWFHEGLDAFEHTCPTGRAIYDNVYAKLVDYLASPENT
DGLDEFIADCRKQHNALKSQLEQGRDRLLELNSNGGEKAQALAEKIAEQDNDTELVNFAL
NLFDIVGINQEDRSDNMIVLTPGDHMLVPDFPGLPEDGCTITFDRGQALSREDAQYVTWE
HPIVRNGLDLILSGDTGSCALSLLKNKALPVGTLLVELIYVVEAQAPKHLQLTRFLPPTP
VRMLVDRKGTNLAGKVEFESFNRQLNAVNRHTGSKLVNAVQQDVHEILQLAEEEAAALAR
ELIDAARQEADEKLSAELSRLDALSAVNPNIRQDEIEALESNREQVLSALNEAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacggaaagcgaattgggattgggc
actatcgtcgcggttgatacgcgtatggtgaccgtactgtttcctgccaccggcgaaaac
cgtctttatgccagaaatgattctcctatcacccgcgtgatgtttaatccgggcgatacc
atcaccagccatgaaggctggcagcttgaagttgaagaagtcaccacggaaaatggcctg
atgacctacatcggcacgcgtctggatacccaggaaaccggcgtggtgatgcgtgaagtg
atgctcgacagcaagctggtgttcagcaaaccccaggatcgcctgttcgccggtcagctc
gaccgcatggatcgctttgccctgcgctttcgcgcgcgtaaatatcagagcgagcagtat
cgcctggcggtcagcggcctgcgcggaatgcgtaccagcctgatcccgcaccagctgcat
atcgcccatgacgtgggccgtcgccatgcgccacgcgtcttgctggcggatgaggtgggc
ctggggaaaaccattgaagcggggatgatcatccaccagcagttgctggcaggccgtgcc
gagcgcgtgctgattgtggtgccggaaacgctgcagcatcagtggctggttgagatgctg
cgccgctttaacctgcgcttcgcgctgtttgacgatgagcgttatgcgcaggcgcagctc
gacagcgacaacgcgtttgaaaccgaacagctggttatctgctcgctcgacttcgtgcgc
cgcaacaagcagcgcctggagatgctggccgaagccgcctgggatctgctgatcgtcgat
gaagcgcaccacctggcgtgggaagagggcaagccgagccgtgaatatcaggtaatcgaa
cagctggctgaacagatccccggcgtgctgctgctgaccgcaacgccagagcagctgggt
atggagagccattttgcccgtctgcgcctgctggatcccaaccgctttcacgatttcgcc
gcctttgttgaagagcagcagcattttcgtcccatcgccgatgcggtaaccggcctgctg
gcggataaagcgctgagccaggatgagctgaatatgctcaacgatctggtgggtgaacag
gatatcgaaccgctgctgcaaaccgccaacagcgatcgcgaagagaaactggaagcccgc
caggaactgatcagcatgctgatggatcgtcacggtaccagccgcgtgctgttccgtaac
acccgcaacggcgtgaagggcttcccgaaacgcgaactgcatgagatccgcctgccgctc
ccttcgcaatatcagaccgcgatcaaagtctccggcatcatgagcgcgcggaaaactgtc
gacgagcgcgcgcgcgacatgctctatccggagcagatttatcaggaatttgaaggcgac
agcggcacctggtggaacttcgatccccgcgtcgagtggctgatgggcttcctgaccagt
caccgcgagcacaaggtgctggtgatctgcgccaaagccgctactgcgctgcagttagag
caggtcctgcgcgagcgcgaagggatccgtgccgccgtgttccacgagggcctctccatt
attgaacgcgaccgcgcggcagcctggtttgcctccgaagaggaaggcgcacaggttctg
ctctgttcggaaatcggatcggaaggccgtaacttccagttcgctaaccagatggtgatg
ttcgatctgccgtttaaccccgacctgctggagcagcgtattggccgtcttgaccgtatt
ggtcaggcgcacgatattcagatccacgtgccttatctggaaaaaaccgcgcagtccgtg
ctggtgcagtggttccatgaagggctggacgcttttgagcacacctgccctaccggccgc
gccatctatgacaacgtttacgctaagctggtggactatctcgcctcgccggaaaacacc
gacggcctggatgagtttattgccgactgccgtaagcagcataacgcgctgaaaagccag
cttgagcaggggcgcgatcgtctgctggagctgaactctaacggcggcgagaaagcgcag
gcgctggctgaaaaaattgccgagcaggataacgacaccgagctggtcaactttgcgctc
aacctgttcgacatcgtggggatcaatcaggaagatcgcagcgataacatgatcgtgctg
acccctggcgatcatatgctggtaccggacttcccgggtttgccggaagatggctgtacc
atcacctttgaccgtggtcaggccctgtcacgcgaagatgcgcagtacgtcacctgggaa
caccctatcgtgcgtaacggcctggatctgatcctctccggcgataccggcagctgcgcc
ctctccctgttgaagaacaaggcactgccggtgggcacgctgctggtggagctgatttat
gtggttgaggcgcaggcgccgaaacatctgcagctcacccgcttcctgccgcctacgcca
gtcagaatgctggtggaccgtaaaggcaccaacctggccggcaaggtggagtttgaaagc
tttaaccgccagcttaatgcggtaaaccgccacaccggcagcaaactggtcaacgctgtt
cagcaggatgtccacgagatcctgcagctggctgaagaagaggccgcagccctggctcgt
gagctgattgacgcggcccgtcaggaagcggatgaaaagctgagcgcggaactctcgcgt
ctggatgctcttagcgccgtcaacccgaacatccgtcaggatgaaatcgaggcgctggag
agtaaccgagagcaggttctgtcggcgctgaacgaagcgggctggcgtcttgacgcgctg
cgcctgattgtcgtgacgcatcagtaa
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