Edaphobacter paludis: P4G45_00085
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Entry
P4G45_00085 CDS
T10404
Name
(GenBank) HAMP domain-containing protein
Organism
epl Edaphobacter paludis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
YscO-like
DUF3450
RNase_Y_N
FBF1
ATG14
IFT57
OmpH
CovS-like_HAMP
Motif
Other DBs
NCBI-ProteinID:
XBH10154
UniProt:
A0AAU7CXN8
LinkDB
All DBs
Position
complement(16014..21782)
Genome browser
AA seq
1922 aa
AA seq
DB search
MATTATVTAKEDKKNKPTGNGKNGKGSSDQSIPQADSLALILASLQTMRDGNFSVRLPVA
WVGLEGKIADTFNDIVAANEQMADELNRVGQAVGKEGKTRERTRFQQSRGSWGRMEGSVN
TLVEDLLRPTTEVTRAIAAVAQGNLAQTVRLDVGGRPLEGEFLRSANIVNTMIQQLGIFT
AEVTRVAREVGTDGKLGGQAVVPGVAGTWKDLTDSVNSMASNLTGQVRNIAEVATAVASG
DLSRKITVDVRGEILQLKEAINTMVDQLRSFASEVTRVAREVGTDGKLGGQAVVPGVAGT
WKDLTDSVNAMAGNLTAQVRNIAEVTTAVARGDLSRKITVDVKGEILELKDTINTMVDQL
NAFAGEVTRVAREVGTEGKLGGQAQVLGVGGTWKDLTDNVNFMASNLTGQVRNIAEVATA
IANGDLSRKITVDVRGEILQLKETLNTMVDQLNRFAGEVTRVAREVGTEGRLGGQANVPG
VAGTWKDLTDSVNSMAGNLTGQVRNIAEVTTAVAGGDLSRKITVDVKGEILELKNTINTM
VDQLNAFAGEVTRVAREVGTEGKLGGQARVSGVAGTWKDLTDSVNFMAGNLTAQVRNIAE
VATAVARGDLSRKITVDVRGEILELKDTINTMVDQLRSFAGEVTRVAREVGTDGKLGGQA
RVPGVAGTWKDLTDNVNFMAGNLTAQVRNIAEVATAIASGDLSKKITVNVSGEILLLKET
INTMVDQLNAFAGEVTRVAREVGTEGRLGGQANVPGVAGTWKDLTDSVNSMAGNLTGQVR
NIAEVTTAVARGDLSRKITVDVKGEILELKNTINTMVDQLNAFAAEVTRVAREVGTEGKL
GGQAQVPDVAGTWKDLTDNVNVMAVNLTEQVRGIVKVVTAVANGELTQKLTVNAKGEVAA
LAETINNMTNTLATFADQVTTVAREVGVEGRLGGQANVPGASGTWKDLTGNVNLLADNLT
NQVRAIAEVATAVTKGDLTRSIQVDASGEVAELKDNINTMIDNLRLTTDRNTEQDWLKTN
LARFTGMLQGQRELTTVGRMLLSELAPLVNAQQGVLYQMEAEEPRNMVLLSAFADSTEGH
QEIVKVGEGLVGQCALEKRRMLISNLPSHTVPIRSGLFESVPRNVIVLPVLFEDRVKAVI
ELASLNNFTPSHLAFLEQLTSSIGIVLNSIEATMQTEGLLKQSQQLAVELQTQQKELQQT
NEQLAQKAKQLAEQNAEVERKNQEIEQARGALEEKAKELALTSKYKSEFLANMSHELRTP
LNSILVLGQQLADNPDSNLTGKQVEFARTIHGAGTDLLNLISDILDLSKIESGTVSVEAE
EVFFGSLIEMVARPFRHEADNRKLVFEVNSDAHLTRSLVTDSKRVQQVLKNLLSNAFKFT
EQGGVRLSVSAVTSGWTERHQILTNAASVIAFEVCDTGIGIPPEKQRIIFEAFQQADAGT
SRKYGGTGLGLAISRELASLLGGEIQLKSTPGKGSTFTLYLPQTYVGPSASNVNPPKDPQ
HGSRFELPASAITAMEEPMEQLQDDRNDIQSGDAVLLIVEDDIHYARILCDLSREKGFKV
LVALRGSEALALAREFHPTAVSLDVALPDMLGWTVLNHLKQDPSTRHIPVQMLTMDEDWH
HGLSHGAFAFVTKPTTPEGLDAAIAHIREYSAPRRKRLLVVEDEPAQQLSIEALLGHDDI
DVSVVSTGSDALTAISTQPFDCAVLDLRLPDMTGFELLEQLSKIQNGRDLPVVVFTGKDL
SPEEDARLHMLARSVIVKDVESPERLLDETALFLHRVVSELPIEKQKMLDRLHQSDEALV
GRKVLIVDDDVRNIFALSSVLERRGMVVLTAGTGREAIATVESTSDLGIVLMDIMMPEMD
GYETMQVIRRNPQFRRLPIIALTAKAMKGDREKCLEAGASEYLAKPVNTEQLLSALRMWL
HR
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaccgccacagttacagccaaggaagacaaaaaaaacaagcccaccggaaat
ggaaagaatggcaagggatcaagcgaccaatcgatccctcaggcagatagtctggcgctc
attctcgcaagtctacagaccatgcgggacggtaatttctccgtgaggctccccgtggcg
tgggttggtctcgaaggtaagatcgccgacacctttaatgacattgttgcggcaaacgaa
cagatggccgatgaactcaatcgagtcggccaggccgtcggtaaagagggtaagacacgg
gagcgcacccgttttcagcagtcccgcgggtcctggggcaggatggaaggttccgtcaat
actctggtcgaggacctgctgagaccgacgacagaagtgactcgcgccatcgccgccgtc
gctcaaggcaatctcgcgcaaaccgtacggttggatgtgggcggaagacctctcgagggt
gagttcctgcgttccgccaacatcgtcaacaccatgattcaacagcttggcatcttcact
gccgaggtcacgcgagtagctcgcgaagtcggcacggacggcaagctcggcggccaggcg
gtagtgcctggggtcgccggtacctggaaggacctcaccgattcggtcaactccatggcg
agcaacctgaccgggcaggtgcgtaatatcgccgaggtcgcgactgccgtggccagcggc
gacctctcgcgcaagattaccgtggacgttcgcggcgagatcctccagctcaaagaagcc
atcaatacgatggtcgatcaattgcgctcctttgcctccgaagtcacccgcgtggctcgc
gaagtgggcacggacggcaagctcggcggccaggcggtagtgcctggtgtcgccggcaca
tggaaagacctcaccgactcggtgaacgccatggctggaaacctgaccgcacaggtccgc
aacattgcggaagttactacggccgtcgcccgcggcgacctctcccgcaagattaccgtc
gacgtcaaaggcgagattctcgaactgaaggacaccatcaacacgatggtcgaccagctc
aatgcctttgctggtgaagttacgcgtgtagcccgagaggtcggaaccgaaggcaagctc
ggcggtcaggcacaggtgctgggcgtcggtggaacctggaaggaccttaccgacaacgtc
aacttcatggccagcaatctcaccggccaggtccgcaatatcgccgaggtggcgaccgcg
attgcgaatggcgacctctcccgcaagatcacggtcgatgtgcgtggagagattctccag
cttaaagaaactttgaacaccatggttgaccagctcaaccgcttcgctggcgaagtaacg
cgtgtggcccgcgaggttggaaccgaaggcaggctcggcggacaggcgaacgtgccgggc
gtcgccggtacctggaaggacttaacggactcggtcaactcgatggccggaaatcttacc
ggtcaggtccgcaatatcgccgaggtcaccacggccgtggcaggcggcgacctctcccgc
aagatcaccgtcgacgtgaagggcgaaattctggagttgaagaacaccatcaacaccatg
gtcgaccagctcaacgccttcgccggtgaagtaacgcgcgtggctcgcgaagtaggaacc
gaaggcaagctcggcggtcaagcgcgggtatcgggtgtcgccggtacgtggaaagacctt
accgactcggtcaactttatggccggaaatctcacggcccaggtacgtaatatcgctgaa
gtggcgaccgccgttgctcgcggcgacctctcccgcaagattaccgtcgacgtccgcgga
gagattctcgaactcaaagacaccatcaataccatggtggatcagctccggtcgttcgcc
ggtgaagtgacgcgtgtcgctcgcgaggtcggtaccgatggaaaactgggcggccaggcc
cgggtgccgggtgtcgccggtacgtggaaggaccttaccgacaacgtcaacttcatggcg
ggcaatctcacggcgcaagtgcgaaatattgccgaggtggcgaccgccattgccagcgga
gacctttccaagaagatcaccgtgaatgtgagcggcgaaattctgctgctcaaagaaacc
atcaacaccatggtggaccagctcaacgccttcgccggtgaagtaacccgcgtggctcgc
gaagttggaaccgaaggaaggctgggtggacaagccaacgtgccgggagtcgcaggcacc
tggaaagaccttacagactcggtcaactcaatggctggaaatctgaccggccaggtccgc
aacattgctgaagtgacaacggcggtcgctcgcggcgacctctctcgcaagatcactgtc
gacgtgaagggcgaaattctggagttgaagaacaccatcaacaccatggtggaccagttg
aacgccttcgccgccgaagtaacgcgcgtcgcccgcgaagtcggcaccgaaggcaagctg
ggaggccaggcgcaggttcccgacgtcgccggaacctggaaggaccttactgacaacgtc
aacgtcatggccgtgaacctgaccgagcaggtacgcggcatcgtcaaggtcgtgaccgcc
gttgctaacggagagctgacccagaagctcacggtgaatgccaagggcgaagtggctgca
ttggcagagaccatcaacaacatgacgaacacgctcgccaccttcgccgatcaggtcacg
accgtcgcccgcgaagtcggtgtagaaggccgcctcggcggacaggcgaacgtgccgggt
gcttccggaacctggaaagaccttaccggcaacgtcaatcttctcgccgataaccttacc
aaccaggtccgcgctatcgccgaagtggcaaccgccgtcaccaagggcgacctgacccgt
tccattcaggtggacgccagcggagaagttgccgaactcaaagacaacatcaacaccatg
atcgacaacttgcggctgaccaccgaccgcaataccgaacaggactggctgaagaccaat
ctcgcccgcttcaccggcatgttgcagggccagcgtgaactgacgaccgtaggccgaatg
ctgctgtcggagctggcgcctctggtcaacgcgcagcaaggcgttctttatcagatggag
gcagaggagccgcgcaacatggtgcttctatctgctttcgcggactcaacggaaggccac
caggagatagtgaaggtcggtgagggtttggttggccaatgtgccctggaaaagcggcgc
atgttgatctccaatctgccaagccatactgttccaatccgttccggcctgttcgagtca
gttccccggaacgtcatagtcctaccggtcctcttcgaagatcgcgtcaaagccgtcatc
gaactggccagcctgaacaactttaccccctctcatctcgccttcctcgaacagttgacc
tccagcatcggcatcgtgctcaacagtattgaagccaccatgcagacggaaggcctgctc
aagcagtcgcaacaactggcggtcgaactgcaaacccagcagaaagagttgcagcagacg
aacgagcagcttgcacagaaggcgaaacagctagccgagcagaatgctgaagtcgagcgc
aagaatcaggagatcgaacaggcccgcggagcgttggaagagaaagccaaagagctcgcc
ctcacctccaagtacaagtccgagttcttggccaacatgtcgcacgaactgcgcacgccg
ctcaacagcattctcgtcctcggccagcagcttgcggataatccggacagcaacctcacc
ggcaagcaggtcgagtttgctcgcacgattcacggcgccggaaccgaccttctcaacctc
atcagcgacatcctggacctgtccaagatcgagtccggcaccgtctccgtcgaggccgaa
gaggtcttcttcggcagcctcatcgagatggtggcgcgccccttccggcacgaggcggac
aaccgcaagctcgtcttcgaggtgaacagcgacgctcatctcacgcgcagtctggtcacc
gactcaaagcgcgtccagcaggtgctcaaaaacctcctctccaatgccttcaaattcacg
gagcagggcggcgtgcgattgtccgtctcggccgttacgagtggttggacagaacgccat
cagatactaacgaatgcagcttccgtcatcgcctttgaggtctgcgacaccggcatcggc
atcccgcccgagaagcagagaatcatcttcgaagccttccagcaggccgatgcgggcacc
agtcgcaaatatggtggaacaggccttggcctcgccatcagccgcgaactggccagcctg
ctcggcggtgagatccaactaaaaagcacgccgggcaagggaagcacctttaccctttac
ctcccgcagacctatgtggggccatctgcctcaaacgtcaacccgccgaaggaccctcaa
catgggtcacgcttcgagctgccagcctccgccatcaccgcgatggaggagccgatggag
cagcttcaggacgaccgcaacgacatacagtcgggcgatgctgtcctgctcatcgttgaa
gatgacatccattacgcacgaattttgtgcgatctgtcgagagagaaaggcttcaaggtt
cttgtggcattgcgaggctctgaagcgcttgcgctggcgcgggagttccacccgacagcg
gtttcgctggatgtcgcattgcccgatatgctcggctggacggtgctgaaccacttgaag
caggacccttcaacccgccacattcccgtccagatgttaaccatggacgaggattggcat
cacggcctctctcatggagcgtttgcgtttgtaaccaagccgacgacgcccgaagggctc
gacgctgccatcgcacacatccgcgaatactccgccccgcggcgcaagcggcttctggtt
gtcgaagacgaacccgcacagcagctcagcatcgaagctctgctggggcatgatgatatc
gacgtttctgttgtctcgaccggttcggatgcgctgaccgctatcagtacccaaccgttt
gactgtgccgtcctcgatcttcggctcccggacatgacaggttttgagttgctggagcag
ttgagcaagattcagaacggaagagatctgcccgtggtcgtcttcactggaaaggacctg
tcgccggaagaagacgcgcgattgcacatgctggcgcgcagcgtcattgtgaaggatgtc
gaatcgcccgaacgcctgctcgacgaaacagccctctttctccacagggttgtatccgag
cttccaattgaaaagcaaaagatgctcgaccgtctgcaccagtccgatgaggcgctggtt
ggccgaaaggtgctcatcgtcgatgatgacgtgcggaatatcttcgcgctcagcagcgtt
ctggaacgccgcggcatggtggtgctaaccgccggaaccggccgcgaggcaattgctacg
gtcgaatccacatccgatctcgggatcgttctgatggatatcatgatgcccgagatggat
ggatatgaaaccatgcaggtgatacggcgaaatccacagttccgccggctacccatcatc
gcattgacggcaaaggcaatgaagggcgaccgcgaaaagtgtcttgaagccggcgcctcc
gagtatttggcaaagcccgtcaatacagaacagttgttgtcggcacttcgcatgtggctt
cacagataa
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