Edaphobacter paludis: P4G45_04090
Help
Entry
P4G45_04090 CDS
T10404
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
epl Edaphobacter paludis
Brite
KEGG Orthology (KO) [BR:
epl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
epl03009
]
P4G45_04090 (rimO)
Enzymes [BR:
epl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
P4G45_04090 (rimO)
Ribosome biogenesis [BR:
epl03009
]
Prokaryotic type
ribosomal protein modification factors
P4G45_04090 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Fe_hyd_lg_C
Motif
Other DBs
NCBI-ProteinID:
XBH11726
UniProt:
A0AAU7DB57
LinkDB
All DBs
Position
complement(1017205..1018791)
Genome browser
AA seq
528 aa
AA seq
DB search
MLEELTSSAPDQSSAKPRPKIGFVSLGCPKNLVDSEVMMGMLHHAGGELTPQAEDAEILV
VNTCSFIDSAKQESVNTILEMVQHKKANGGRAQRLIVAGCLVERYRDEIQKNIPEVDAVV
GTGELEAILAAAGLSPTGHANNSPFQILTQAQIDRAPSAVNQHSRPEESSPQLQIEQGHL
ASRPEGDLREQQGRFSRAAWDGATAALPEYLYSDTTPRILTTPRASAYIKIAEGCDHPCG
FCIIPQLRGKFRSRRMSSIITEADALIAQGVREITLIGQDTTCYGEDLGIKDGLAQLLEA
LAVLPGLRWLRFLYAYPNKVTTRLLETIARHDNIAKYLDVPLQHASPSVLKRMKRGGTPE
VFLKLIEKARSIVPGIVLRTSFIVGFPGETEEDYNQLEAFITTARIDWLGVFTYSDEEGA
AAFELASELKVPKRTIEARRRKLMKLQQKISAKSKSQWIGREIDLLVEGPSEETDLLWEG
RTPLHAPEIDGKVFINDFGPHEALVPGTFYRAEITESHDYDVVARILD
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
attctcgaagagctgacttcgtcagcccctgaccaatcctcggccaagccccgccccaaa
atcggcttcgtctccctcggctgccctaaaaacctggtcgactctgaagtcatgatgggc
atgctccatcatgctggcggtgagctcaccccgcaagccgaagacgcagaaatccttgtc
gtcaatacctgcagcttcatcgactccgccaagcaggagtccgtcaacaccatcctcgag
atggtgcagcacaagaaggccaacggcggccgcgcccagcgcctcatcgtcgcaggttgt
ctcgtcgagcgttaccgtgacgagatccaaaaaaatattcccgaagtagacgcggtcgtg
ggcacaggcgaactcgaagccatcctagccgccgcaggtctttctcccacgggccacgcc
aacaactctcccttccaaatcctcacgcaggcacagatcgaccgcgctcccagcgccgta
aaccagcacagccgccccgaagaatcctctccgcagctccagatcgagcagggccacctc
gccagccgccccgagggcgacctacgcgagcagcagggccgcttctcacgcgccgcctgg
gacggcgccaccgccgctctccccgagtacctctacagcgacaccacgccgcgcatcctc
accacaccccgcgccagcgcctacatcaagatcgccgaaggctgcgatcacccctgtggt
ttctgcatcatcccgcagcttcgcggcaagtttcgctcgcgccgtatgtcctcgatcatc
accgaggcggacgccctgatagctcagggcgtccgcgagatcaccctcatcggccaggac
accacctgctacggcgaagacctcggcatcaaggatggccttgcccagctccttgaagcc
cttgccgtgcttcccggcctgcgttggttgcgcttcctctacgcctaccccaacaaggtc
accacgcgcctgctggagaccattgcccgccacgacaacatcgccaagtacctagacgtg
cccctccaacacgccagcccctccgtgctcaagcgcatgaagcgcggcggaacccctgaa
gtcttcctcaaactcatcgagaaggcccgcagcatcgttcccggcatcgtcctccgtacc
agcttcatcgtcggcttccccggcgagaccgaagaggactacaatcaactcgaagccttc
atcaccaccgcccggatcgactggctcggcgtcttcacctactccgacgaagagggcgcg
gccgccttcgagctagcctccgagctgaaggtccccaaacgcaccatcgaagcgcgccgc
cgcaagctgatgaagctccagcaaaagatcagcgcgaagtccaagtcccaatggataggc
cgcgagatcgacctgctggtcgaaggacccagcgaagagaccgacctcctctgggaaggc
cggactccgctgcacgcccccgagatcgacggcaaggtcttcatcaacgacttcggcccc
cacgaagccctcgtccccggcaccttctaccgcgccgaaatcaccgagtcccacgactac
gacgtagtcgctcgcatcctcgactaa
DBGET
integrated database retrieval system
