Edaphobacter paludis: P4G45_04315
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Entry
P4G45_04315 CDS
T10404
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
epl Edaphobacter paludis
Brite
KEGG Orthology (KO) [BR:
epl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
epl03032
]
P4G45_04315
03036 Chromosome and associated proteins [BR:
epl03036
]
P4G45_04315
03400 DNA repair and recombination proteins [BR:
epl03400
]
P4G45_04315
DNA replication proteins [BR:
epl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
P4G45_04315
Chromosome and associated proteins [BR:
epl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
P4G45_04315
DNA repair and recombination proteins [BR:
epl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
P4G45_04315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Urease_beta
Motif
Other DBs
NCBI-ProteinID:
XBH10955
UniProt:
A0AAU7DB95
LinkDB
All DBs
Position
complement(1066057..1066326)
Genome browser
AA seq
89 aa
AA seq
DB search
MIKQDLIQRVVERTGLPRTKAEAAVDAIFDSMKQNLIAGDRIELRGFGVFTVKPRKTGIG
RNPRTGAEVTIAPGKAVRFKPGKELHLLE
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcaagatcttatacaaagggtggttgagcgtaccggcctgccgagaacaaaa
gcagaggctgccgttgacgctatcttcgatagcatgaaacaaaacctgatcgcgggcgac
cgcatcgaactccgcggattcggcgtcttcaccgtaaaaccgcgcaaaaccggtatcggg
cgcaatccgaggacaggcgctgaagtcaccatcgctccgggcaaagccgtccgcttcaag
cccggcaaagagcttcacctgctcgagtag
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integrated database retrieval system
