Edaphobacter paludis: P4G45_04480
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Entry
P4G45_04480 CDS
T10404
Name
(GenBank) translocation/assembly module TamB domain-containing protein
Organism
epl Edaphobacter paludis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF748
YhdP
Motif
Other DBs
NCBI-ProteinID:
XBH10988
UniProt:
A0AAU7CZQ0
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All DBs
Position
1098555..1102943
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AA seq
1462 aa
AA seq
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MSDREKMPLPERLEEKLNEELVKMKRSLGGRAAHVIAWIFGGFSILLLVLVAAFSWYSTT
NDFNQRVSKAVVNVLENATGGRVELQKISFKLWHLAIEADGLVIHGLEGPGEAPYLSADK
IQVSVRIFSFFSHVAGTGIASHVSLSFLRVDNPQVHLIIDKNGKTNQPVPKHPSTSKEPV
LDTLLDLKAKQVELANGVLLLNDRAIPFDLAARDLDAEVHYIASSDHYGATVDLKDLRTK
LDKEPEANSTLHVEAEVGRNMAEVKNLVLHTGEASEVKASASIKNFAHPEWQASVDGTLE
LKQIAVLSGVDGLKAGTVDLVLKGHSCYTTPAAAQKHPRFWQRLHPKSNGKPSTKVLPPD
PDCVAGYLLVGNAKIHKAAYRDEYVRLSDIDGSSDLHITPTELLLTALTGYLPGGGSAAG
ELRISNWLGEVPANAPASPTTKAAVTTTNATANAMGAKAPITGKIALPPVERAHAYLSAT
INKIPLRTIMDVTAPENYGDLGFDTAVSGPVKMEWGGPAKDIADTVVADGTLKFAPTGVH
RKGALSDIPVTGEARAHYSGTNETVQIENITLQTPQSNIDASGILGVNEGDPLTALRVDL
TVRDLGEYNQLLLTLGLEGNGKKGAAAIPVVLHGALQFNGTARGAIRDLDVKGHLDASNV
EAKIGTTDALIDSLVANAEYSPNSGLLVATSTVKRGTAVLKVIGDLKPRKVVSHRGVTTY
VWDEGMALDAQVQLADAQMADLLEITGQQQKVPVTGTVAANGHLSGTLKQLNGSGHLSLL
KGIAYGEPYDSAAADLTAHGQDIEVSNVLLKLHGMEIAGNGGYDMGSEHLHGHIEGQNLL
LSKFDTVQKANSSVDATLSVVADANGTLKEPGLKANVKLSGITVKGQPVGDAVAEAHTQG
ETMYVTANSTAVGAKLVATGQVQLSGNYETQAKVTLTGLDIGKPLAMFGTGTLKAQSAIN
GTVTVSGPLKTPKALSGTAEFNPVDVTLQGVELKAAEPLRASLKDGMATVEQLHITGQDT
DLKFSGTAQIFGVTDPKGGKLNVKGSGSVSMALLHTFRSDLITSGKIEFTVAAGGQVKNP
ALTGKVQFDNVNLAMDGIPNGLNKMNGTLVFNEDRLQVENLTATTGGGQLKIGGYIRYRN
GLFADLNATGDVVRVRLYGLSATATTKLRLQGSSDSALLSGTVLLTRFGVGPDVDLAAFA
ATGGVSAPPDPNALSNKIRLSVRITSSPQLDFQNSYAKLAGTVDLTVRGTVATPSVLGRI
QITDGSATFAGTKYQLQRGDVYFTNPVRIDPIIDLDATAQVENYDITVGLHGTMTNLKPT
YRSEPPLSEADVFALLALGRTQEEAQIYSEKQAQAGTDPTTSALLGGALNATVSNRVEKL
FGVGSVKIDPAFVGTLGNSAARITVQQQLSKQITATFATNVNSSAQQLIQVQYDLNHNMS
IVVTRDESNVFSIVYKLRQRYR
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatcgagagaagatgccgctgcccgaaagactggaagagaagctcaatgaggag
ctcgtcaagatgaagcgctcccttggcggaagagctgcgcacgtcattgcgtggatcttt
ggcggcttcagcattcttctgcttgttctggtggcggcgttctcctggtactcgacgacg
aatgatttcaatcagcgggtaagcaaagcggttgtgaacgtgctggagaatgcgaccggc
ggtcgcgttgaacttcagaagatcagcttcaaactttggcaccttgccatcgaggccgat
ggccttgtgattcacgggctcgaaggcccgggagaagcgccgtatctgtcggcggacaag
atacaggtaagcgtcaggatcttcagcttcttttctcatgtagcaggcaccggcatcgca
tcgcacgtcagcctgagctttctgcgtgtggacaatccgcaggtgcatctgataatcgac
aagaacgggaagacaaaccagcctgtgcccaagcatccgagtacgagcaaggagccggta
ctcgatacgctgctggacctgaaggcgaagcaggtcgaactggcgaacggcgtgctcctg
ctgaacgatcgggcgattccgtttgatctggcagcgcgcgatctcgatgccgaggtccac
tacattgcatcgagcgatcactacggtgccacggtcgatctgaaagacctgcggacgaag
cttgacaaggagccagaggcgaactccacgctgcatgtcgaggccgaggtaggccggaac
atggctgaggtaaaaaacctcgtgctgcatacgggcgaggcatcggaagtgaaggcgagc
gcgagcatcaagaacttcgcccatcctgagtggcaggcaagcgtagacggcactctggaa
ctaaagcagattgccgtgttgagcggcgtggacggattgaaggctggcaccgtggacctc
gtcctgaaaggccacagttgctatacgacaccggctgccgcgcagaagcatcccagattc
tggcagcggcttcatccgaaatcgaatgggaagccgagtacgaaggttctgccgcccgac
ccggattgcgttgctggatatctgctggtgggcaacgcgaagatacacaaggcggcctat
cgcgatgagtacgtcagactgagcgatatagacggcagctccgatttacatatcacgccg
acggaactgctgctgactgcgttgactgggtaccttcccggcgggggaagcgcggcgggc
gagctgcgcatatccaactggctgggcgaggtcccggcgaatgctcctgcttcgcccacg
acgaaggccgcggtgaccactaccaatgcaacggcgaatgcgatgggcgcaaaggctccc
attacaggaaagatcgcgttgccgcctgtcgagcgggcgcacgcctatctgtcggccacg
atcaacaaaattccgctgcgcaccatcatggatgttacggcgccggagaactatggcgat
ctgggttttgataccgccgtgagtggcccggtcaagatggaatggggcggcccggcgaag
gacatcgccgacacggtggtcgccgatggcacactgaaatttgcgccgaccggagttcat
cgcaaaggtgcgctctcggatattccggtgaccggcgaggcgcgagcgcattactcggga
actaacgagacagtccagattgagaatataacgctgcagacgccgcaatcgaacatcgac
gcaagtggcatcctgggggtaaatgaaggcgatccgctgacggcattgcgcgtcgacttg
acggtgcgcgaccttggcgaatacaaccagttgctgttgacgctgggactcgaagggaat
ggcaagaagggcgcagcggcaattcctgtcgtgcttcatggagcgctccagttcaacgga
acggcgcgtggagcgatccgcgatctcgatgtgaaaggccacctcgacgcgtcaaatgta
gaggcgaagatcggcacgacggatgctctgatcgattcgcttgttgcgaacgcagagtac
tcgcccaactcgggactgctggtggcgacttcgacggttaagcgcggaaccgccgtactg
aaggtgattggcgatttgaagccgcggaaggtggtatcgcatcgcggcgtcacgacctat
gtgtgggacgaaggcatggctctcgacgcgcaggtgcaactggccgatgcgcagatggct
gatttgcttgagataaccggccaacagcagaaggttccggtgacgggaacggtcgctgcg
aatgggcatctgtcgggaacattgaagcagttaaacggcagtgggcacctctcgctgctg
aagggcattgcctatggagagccgtatgactccgctgcggctgacctgaccgcgcacggc
caggatattgaagtgagtaatgttctgttgaagcttcatggaatggagattgccggcaat
ggcggctacgacatgggcagtgaacatcttcacggccacatcgaagggcagaatcttttg
ctgtcaaagttcgacacagtgcagaaggcgaattccagcgtagacgcgacgctgagcgtg
gtcgccgatgcgaatggcaccttgaaagagccgggactgaaggccaacgtgaagctgtct
ggcatcaccgtcaaagggcagcctgtgggcgatgccgtcgccgaggcacacacgcagggc
gagacgatgtatgtcacggccaactcaacagccgtcggagcgaagctcgtggcgacgggg
caggtgcagttaagtggcaactacgaaactcaggcgaaggtgacgctgaccggcctcgac
attggcaagccattggctatgtttggcaccggcaccctgaaggcgcagtcagcgatcaat
ggtacggtcacggtgagcgggccgctcaagacaccgaaggcgctgagtggaaccgcggag
ttcaacccggtcgacgtgacgttgcagggcgtggaactgaaggccgccgaacccttgcga
gcgagtctgaaagatggaatggcgacggtggagcagcttcacatcaccggccaggacacg
gacctcaagttcagcgggacggcgcagatattcggcgtgacagatccgaagggtggcaag
ctgaacgtgaagggaagcggaagcgtcagcatggcgctgctgcatacattccgctccgac
ctgatcacgagtggaaagatcgagtttacggttgccgcgggcgggcaggtgaagaacccc
gcgctcactggcaaggtgcagttcgacaacgtgaacctggctatggacgggattccgaac
ggtctcaacaagatgaatggcacgctcgtcttcaatgaagaccggctgcaggtcgagaac
ctgacggcaactaccggaggcggtcagttgaagattggcggctatatccgctatcgcaat
ggcctgtttgccgacctgaacgcgactggcgatgtcgtgagggtgcggttgtatggcctg
agtgctacggcaaccacaaagctgaggttgcagggttcttcggacagtgcgctattgagc
ggaacggtgttgctgacaaggttcggcgtcgggccggatgtcgaccttgcggcatttgca
gcgactggcggcgtgagtgcgccgcctgacccgaatgctctctccaacaaaattcgcctc
agtgtacggatcacgagttcgccgcagctggactttcaaaactcgtacgccaaacttgcg
ggaacggtggacctgaccgtacgcggaacggttgcgacaccttccgtgctgggccgcatc
cagatcaccgatggcagtgcgacttttgcgggtacgaagtaccagttgcagcgcggcgat
gtctactttaccaaccccgtgcgcatcgacccgatcattgatctcgacgccaccgcacag
gtcgagaactacgacatcacggtcggcctgcatggaaccatgacgaacctcaagccgacg
tacagatcggagcctccgttgagcgaagccgacgttttcgctctgctggcgctcggccgc
acccaggaagaggcgcagatttattcggagaagcaggcgcaggcgggcacagatccgacg
accagcgcgctgcttggcggagcactgaatgcgaccgtgagcaatcgcgtggagaagctg
ttcggtgtgggaagtgtgaagatcgatcccgcattcgtgggaacgctgggaaactcggcg
gcaagaattacggtgcagcagcagctatcgaagcagatcacggcgacctttgccaccaac
gttaacagttcggcgcagcagttgatccaggtgcaatatgacctgaatcacaatatgtcc
atcgtggtgacgcgcgacgagtccaacgtcttcagtattgtttataagctgcggcaaagg
tatcgttag
DBGET
integrated database retrieval system
