Edaphobacter paludis: P4G45_04870
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Entry
P4G45_04870 CDS
T10404
Name
(GenBank) OB-fold nucleic acid binding domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
epl Edaphobacter paludis
Brite
KEGG Orthology (KO) [BR:
epl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epl03019
]
P4G45_04870
Messenger RNA biogenesis [BR:
epl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
P4G45_04870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
tRNA_anti_2
TraI_2
RMI2
COPIIcoated_ERV
EIF3CL_C
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
XBH11061
UniProt:
A0AAU7DAY5
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All DBs
Position
1189120..1190097
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AA seq
325 aa
AA seq
DB search
MKDFFIADAAKFDNVMVTSYFALSSLSVREKKQGGQYLALTLTDKTGTMEARMWDEVADA
LASCSEGCYVKVQGQVSKYQGKFQITLQKMRNAAESEVDPADYLPATRFDVDEMWAELRG
YVSQFTNADLKRLVFSFLDDEAIAAAYRSAPAAKRLHHAWLGGLLEHVVTLVRVCLATAP
FYAEVDPDLLVTGAILHDIGKTRELHWQKSFGYTLEGQLIGHISIAQGMLVEKVKELAPF
PEKLRVLVEHMILSHHGKYEFGSPKLPMTPEALLLNVLDDLEAKMQVLRNEFAAATASGR
SSEEMTEWVRSMDRPLLDSRGYLND
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacttctttattgccgacgcggcgaagttcgataacgtcatggtgacttcctat
ttcgcactgtcctcactgtcggtgcgggagaaaaagcagggcggccagtatcttgcgctt
accctgaccgacaagaccggaacgatggaagcccgcatgtgggacgaggttgccgatgcg
ctggcgagttgctcagagggctgctatgtcaaggtgcaggggcaggtcagcaagtatcag
ggtaagtttcagatcactctgcagaagatgcgtaacgctgctgagagcgaggttgacccg
gctgattaccttcccgcaacgcgcttcgacgtcgatgagatgtgggcggaactccggggg
tatgtctcgcaatttacgaacgccgacctcaagcggctggtcttttccttcctcgatgac
gaggcaatcgcggcagcgtaccgcagtgcgccagcggccaagcgcctgcaccacgcctgg
ctgggaggcctgcttgagcacgttgttacattggtgcgtgtctgcctggccaccgcacct
ttttatgccgaagtagatccggacctgctcgtcaccggggcgatcctgcatgacatcggc
aagacccgcgagctccactggcaaaagagcttcggttatacgctcgaaggccagctgatc
ggccacatcagcattgcccagggaatgctggttgaaaaggtgaaggagctggcaccgttt
cccgaaaagctgcgcgtactggtagaacacatgattctgagccaccacggcaagtatgag
ttcggctcgcccaaactacccatgactcccgaggcgctgctgctaaacgtgctcgacgat
ctggaagcgaagatgcaggtgctacgaaacgaatttgcagccgccacagcgagcggaaga
tccagcgaagagatgacggagtgggttcgcagcatggaccgcccgctgctcgactcacgc
ggctacctgaacgattga
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