Edaphobacter paludis: P4G45_05190
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Entry
P4G45_05190 CDS
T10404
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
epl Edaphobacter paludis
Pathway
epl03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
epl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P4G45_05190 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P4G45_05190 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
AAA_16
RsgA_GTPase
BCA_ABC_TP_C
AAA_21
nSTAND1
AAA_25
AAA_23
DnaJ_CXXCXGXG
AAA_22
nSTAND3
ATPase
cobW
Viral_helicase1
SLFN-g3_helicase
NACHT
FtsK_SpoIIIE
NMDAR2_C
Motif
Other DBs
NCBI-ProteinID:
XBH11124
UniProt:
A0AAU7D1F6
LinkDB
All DBs
Position
complement(1266954..1270040)
Genome browser
AA seq
1028 aa
AA seq
DB search
MGITHITVRGARQHNLRNVNVSIPRNTLTVVTGLSGSGKSSLAFDTIYAEGQRRYVETLS
AYARQFLDQMERPDVDAIDGLSPAISIEQKTTSRSPRSTVGTITEIYDYLRLLYASVGQP
HCPNCHRPITRQSAEQIVERIASLSPGERITVYAPIVRGRKGEFREELEALDQQGFRARI
DGEMTELTDGMRLEKRKNHTIEAVVDRIILKHIPGETKFDTRRLETSVLKALQMANGLVL
IGIQGMDETLYSSSMACPDCGINVPRLEPRSFSFNSNYGACPECHGLGSIYDFDPAKTIT
DWSKPLLDGAMGPGSGSAYLLRLIKLAAEKYKISLKLPFEDLTAEQQNLFLYGPPKAEAS
RTGFHGIFDYLRRNLEDTKSEGYREYMMQYMSATLCPRCHGKRLRPESLAVTIPVPATTS
GAPFIAGSHPATSGVTNDQRHGLSIADFTALPLDRALSHARAMHFTGRDRIIADRLQREI
IERLEFLNAVGLSYLALNRSAATLSGGEGQRIRLATQIGSRLRGVLYVLDEPSIGLHQRD
NQRLITALENLRDLGNTVLVVEHDEDTIRKADYVLDLGPGAGKNGGHLIADGTPQQIMDN
PASITGQYLAGKIEIVARAQPRELTGNWITVEDAHSHNLQNVTAHFPLGVMTVITGVSGS
GKSTLVNDILYRALAKNLYGSREEPGQHGRVVGIDQLDKVIQIDQSPIGRTPRSNPATYT
GVFTAMRDLFAMLPESRERGYKPGRFSFNVQGGRCEACQGEGQRRIEMNFLPDVYVLCEV
CNGRRYNQETLSVKFNGYSIADLLDLPIEDAVPILKDIPTVNVKLQTLVDVGLGYIHLGQ
SATTLSGGEAQRMKLARELSKRQTGRTLYLLDEPTTGLHFDDVRKLLEVLHRLTDLGNTV
IIIEHNLDIIRNADYILDLGPEGGEGGGRIIAHGTPEQIATVADSFTGNFLARHYNLSPE
ALASRNGDSHAGPQALNIVAAADRKKDARGKFIVPPKKTGVPLAGAPKPEPKPKKAPKSK
PAPRKKKA
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcacgcacatcaccgtccgcggagcgcgccagcacaacctgcgcaacgtcaac
gtcagcatcccgcgcaatacgctcacggtcgtcaccggcctctctggctcgggcaagtcc
tcgctcgccttcgacaccatctacgccgagggtcagcgccgctacgtcgaaaccctctcc
gcctacgcccgccagtttctcgaccagatggagcgccccgacgtcgacgccatcgacggc
ctctcccctgccatctccatcgagcagaagaccaccagccgcagcccccgctccaccgtc
ggcaccatcaccgagatctacgactacctccgcctcctctacgccagcgtaggccagccc
cactgccccaactgccaccgtcccatcacccgccagtccgccgagcagatcgtcgaacgc
atcgcctctctctcccccggcgaacgcatcaccgtctacgctcccatcgttcgtggccgc
aaaggcgaattccgtgaagagctcgaagccctcgaccagcagggcttccgcgcccgcatc
gacggcgagatgaccgagctcactgacggaatgcgcctcgaaaagcgcaagaaccacacc
atcgaagccgtcgtagaccgcatcattctcaaacacatccccggcgaaaccaagttcgac
acgcgccgcctcgaaaccagcgtcctcaaagctctgcagatggccaacggcctcgtcctc
atcggcattcagggcatggacgaaacgctctactcctcctcgatggcctgccccgactgc
ggcatcaacgtcccccgtctcgagccccgcagcttctccttcaactccaactacggcgcc
tgccccgagtgccacggcctcggcagcatctacgacttcgaccccgccaagaccatcacc
gattggtccaagcccctgctcgacggagccatgggccccggcagcggctccgcctatctc
ctgcgccttatcaagctcgccgccgaaaaatacaagatcagcctcaagcttcccttcgaa
gacctcaccgccgagcagcagaacctcttcctctacggccccccaaaagccgaagccagc
cgcaccggcttccacggcatcttcgactacctccgccgcaacctcgaagacaccaaatcc
gagggctaccgcgagtacatgatgcagtacatgtcggcgaccctctgcccgcgctgccac
ggcaaacgcctgcgcccggagtccctcgccgttaccatccccgtccccgccaccacatcg
ggtgccccattcatcgcagggtctcatcctgcaacgagtggggtgacaaatgaccagcgc
cacggtctctccatcgccgacttcaccgcccttccactcgaccgcgccctcagtcacgcc
cgcgccatgcacttcaccggacgcgaccgcatcatcgccgaccgccttcagcgcgagatc
atcgagcgcctcgaattcctcaacgccgtcggcctcagctaccttgcgctgaaccgcagc
gccgccaccctctctggcggcgaaggccagcgcatccgcctcgccacgcagatcggctct
cgcctccgcggcgtcctctacgtgctcgacgagcccagcatcggcctgcaccagcgcgac
aaccagcgcctcatcaccgcgctcgaaaacctccgcgacctcggcaacaccgttctcgtc
gtcgagcacgacgaagacaccatccgtaaggccgactacgtcctcgacctcggccccgga
gccggcaagaacggcggccacctcatcgccgacggtaccccgcagcagatcatggacaac
ccggcgtccatcaccggccagtacctcgccggaaagatcgaaatcgtcgcccgcgcccag
cctcgcgagcttaccggcaactggatcactgtggaagacgcccactcccacaacctgcaa
aacgtcaccgcccacttccctctcggcgtcatgaccgtcatcaccggagtcagcggctcg
ggcaaatccaccctcgtcaacgacattctctaccgggcgttagctaaaaatctatacggg
agccgcgaagaacccggccagcatggtcgcgtcgtcggcatcgaccagctcgataaagtc
atccagatcgaccagtcccccataggccgcacgccgcgctcgaaccccgccacctacacc
ggcgtcttcaccgcgatgcgcgacctcttcgccatgctgcccgagtcacgtgagcgtggc
tacaagccgggacgtttcagcttcaacgtgcagggaggccgctgcgaagcctgccagggc
gaaggccagcgccgcatcgagatgaacttcctgcccgacgtctacgtcctctgcgaggtg
tgtaacggccgtcgttacaatcaggagaccctctcggtcaagttcaacggctatagcatc
gccgacctccttgatctgcccatcgaggacgccgtgccgatcctcaaagacatccccacc
gtcaacgtcaagctgcaaaccctcgtcgatgttggcctcggctacatccatctcggccag
tccgccaccacgctctcgggcggcgaggcccagcgcatgaagctcgcccgcgagctatcc
aaacggcagaccggccgcaccctctacctgctcgacgagccgaccaccggcctccacttc
gatgacgtgcgtaagctgctcgaagttctccaccgcctcaccgacctcggcaataccgtc
atcatcatcgagcacaacctcgacatcatccgcaacgccgattacatcctcgacctgggc
cccgaaggcggtgagggcggcggacggatcatcgctcacggcaccccggagcagatcgcc
accgtcgcagactcgttcaccggcaacttccttgcccgccactacaacctctcgccagaa
gctctcgccagccgcaacggcgacagccatgcaggccctcaggcgctcaatattgtcgcc
gctgccgaccgcaagaaagatgcacgcggcaaattcatcgttccaccaaagaaaaccggg
gtacccttagctggcgctccaaaaccagagccgaaacccaagaaagcgccaaagtccaag
ccagcgccccgcaagaaaaaagcatga
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