Edaphobacter paludis: P4G45_05505
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Entry
P4G45_05505 CDS
T10404
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
epl Edaphobacter paludis
Pathway
epl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
epl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P4G45_05505 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epl03400
]
P4G45_05505 (uvrB)
DNA repair and recombination proteins [BR:
epl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P4G45_05505 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P4G45_05505 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
Microtub_bd
DUF87
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
XBH11187
UniProt:
A0AAU7D1G6
LinkDB
All DBs
Position
complement(1337885..1339873)
Genome browser
AA seq
662 aa
AA seq
DB search
MDFQLSTTYKPQGDQPRAIDELVSGLNAGEKDQVLLGVTGSGKTFTMAKVIAESNRPALI
LAHNKTLAAQLYHEFKTFFPNNAVEYFVSYYDYYQPEAYIPSGDLFIEKEATINEELDKL
RLSATRSLFERRDCIIVSSVSCIYGLGSPEAYYGMLLLLEKGQKIKREDITRRLVEILYE
RNDVDFRRGTFRVRGDIIEVYPTYDENAYRIELFGDEIDSLSQIDPLFGSVRQKYSRLPI
YPKSHYVVQPERKKAASESILEELFEWEAQLEKEGRLVESQRIHQRTRFDLEMIKSVGYC
HGIENYSRHMSGRLPGEPPPTLLDYFPRDFLIFIDESHVTVPQLHGMWHGDRSRKQNLID
YGFRLPSALDNRPLRFEEFESRTGQIIYVSATPGPYELTKAAGVVVEQIIRPTGLIDPVV
EIRPVKGQIDDLLAEIRDRTAKNQRVLVTTLTKRMSEDLASYYTEVGVRCRYMHSEIETL
ERIKLLRDLRKGEYDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSQGSLIQTIGRAA
RHLEGRAILYADKMTDSMQRAINETDRRREKQVAYNEEHGITPESIIRPLEMGLAGILKA
DYADLTDEAEGMPDFSTQQELDTYIGKLESDMREAAKKFEFEKAAKLRDTVKELRTKEFL
FS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggacttccagctctccaccacctacaaaccccagggcgaccagccccgagccatcgac
gaactcgtcagcggtctcaacgccggagagaaagatcaagtcctgctcggcgtcaccggc
tccggcaaaaccttcaccatggccaaggtcatcgccgagtccaaccgccccgccctcatc
ctcgcgcacaacaaaaccctcgccgcccagctctatcacgagttcaagaccttcttcccc
aacaacgccgtcgaatacttcgtctcctactacgactactaccagcccgaagcctacatc
ccctccggcgacctcttcatcgaaaaagaggccaccatcaacgaagagctggacaagctc
cgcctctccgccacacgctccctcttcgaacgccgcgactgcatcatcgtcagctccgtc
tcctgcatctacggcctcggctcacccgaagcctactacggcatgttgctcctcctcgaa
aaaggccagaagatcaagcgcgaagacatcacccgccgcctggtcgaaatcctctacgag
cgcaacgacgtcgacttccgccgaggcaccttccgtgtccgtggagacatcatcgaggtc
tatcccacctacgacgaaaacgcctaccgcatcgagctcttcggcgacgagatcgactcg
ctctcgcagatcgaccccctcttcggcagcgtccgccaaaaatactcccgcctccccatc
tacccaaagtcccactacgtagtccagcccgagcgcaaaaaagccgcctctgaatccatc
ctcgaagagctcttcgagtgggaagcgcagctcgaaaaagagggccgcctcgtcgagtcc
cagcgcatccaccagcgcacccgcttcgacctcgagatgattaaatccgtaggctactgc
cacggcatcgagaactactcccgccacatgtccggccgcctccccggcgaaccgccgccg
acgctgctcgactacttcccccgggacttcctcatcttcatcgacgagtctcacgtcacc
gtccctcaactccacggcatgtggcacggcgaccgcagccgcaagcagaacctcatcgac
tacggcttccgcctgccctccgcgctcgacaatcgccccctgcgcttcgaagagttcgag
tcccgcaccggccagatcatctacgtctccgccacccccggcccctacgaactcaccaaa
gccgccggtgtagttgtagagcagatcatccgtcccaccggcctcatcgatcccgtagtc
gagatccgccccgtcaagggacaaatcgacgatctcctcgccgagatccgcgaccgcacc
gcaaaaaaccagcgcgtcctggtcaccaccctcaccaaacgcatgtccgaagacctcgcc
agctactataccgaggtcggagtccgctgccgctacatgcactccgagatcgaaaccctc
gagcgcatcaagctcctccgcgacctgcgcaagggcgagtacgacgtcctcatcggcatc
aacctcctgcgcgaaggcctcgacctccccgaagtctccttagtcgccatcctcgacgcc
gacaaagaaggcttcctccgctcgcaaggctccctcattcaaaccatcggccgcgccgcc
cgccacctcgaaggtcgcgccatcctctacgccgacaagatgaccgactccatgcagcgc
gccatcaacgagaccgaccgccgccgcgaaaagcaagtcgcctacaacgaagaacacggc
atcaccccggagagcatcatccgcccactcgaaatgggtctcgccggaatcctcaaagcc
gactacgccgacctcaccgacgaagccgaaggcatgcccgacttctccacccagcaggaa
ctcgacacctacataggcaaactagaatccgacatgcgcgaagccgccaaaaaattcgaa
ttcgaaaaagcagccaaactccgcgacaccgtaaaagaactccgcaccaaagaattctta
ttcagttag
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