Edaphobacter paludis: P4G45_13065
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Entry
P4G45_13065 CDS
T10404
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
epl Edaphobacter paludis
Pathway
epl00300
Lysine biosynthesis
epl00470
D-Amino acid metabolism
epl01100
Metabolic pathways
epl01110
Biosynthesis of secondary metabolites
epl01120
Microbial metabolism in diverse environments
epl01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
epl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
P4G45_13065 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
P4G45_13065 (dapF)
Enzymes [BR:
epl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
P4G45_13065 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
XBH09410
UniProt:
A0AAU7CWW0
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All DBs
Position
complement(3142859..3143662)
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AA seq
267 aa
AA seq
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MIPFVKAHACGNDFLIIEENFAQRRHADLARKLCARNTSVGADGIEFLERKPNGEFFLRL
FNADGSEAELSGNGTRCVAAWLASSEGKQHVALGTHGGLRTCQVVKAADPLYLIESEMGV
PRVMQRTIELPEIGNVAGAMVNVGNPHFVLFVDTDDFSAHGKSWQDLGARISTSPLFPHG
TNVEFVRVISPTEIAFRIYERGCGPTTSSGTGTCASSAAAMALRGVERSLTAIAEGGAQQ
TVWPANDAVMRLTGPAEIICRGEVAAL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgattccttttgtaaaggcacacgcctgcggcaacgactttttgatcatcgaagagaat
ttcgctcagcggcgtcacgccgatctggcgcgtaagctttgcgctcgcaacaccagcgtc
ggtgcggatggaattgaatttcttgagcgtaagccgaacggcgagttctttctgcggctc
ttcaacgccgacggcagcgaggccgaactctccggcaacggtacccgttgtgtagccgcg
tggctggcgagcagcgaagggaagcagcatgtcgctctcggcacgcatggcggcctgcga
acctgtcaggtagtgaaagccgccgacccgctttacctgatcgagagcgagatgggcgtg
ccgcgcgtgatgcagcgaacgattgagcttccggaaatcggcaacgtggccggcgcgatg
gtcaacgtaggtaatccgcactttgtcctcttcgtggatacggatgatttcagcgcgcat
ggtaaaagctggcaggacctcggcgcccgcatcagtacaagtcctctgtttccgcacggc
accaatgtcgagttcgttcgcgtcatctcgccgacagagattgccttccgcatctacgag
cggggctgcggtcccacgacatcgtcgggcaccggcacctgcgcttcctccgcagccgca
atggcgttgcggggtgtggaacgctcgctcaccgccatcgccgaaggcggagcgcaacag
accgtctggcccgccaacgatgcggtaatgcgcctcaccggcccagctgagatcatctgc
cgcggagaggttgccgcactgtga
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