Edaphobacter paludis: P4G45_13295
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Entry
P4G45_13295 CDS
T10404
Name
(GenBank) Rne/Rng family ribonuclease
Organism
epl Edaphobacter paludis
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
XBH09454
UniProt:
A0AAU7CVE4
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All DBs
Position
complement(3191990..3195457)
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AA seq
1155 aa
AA seq
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MSKEIYISSTPHETRLAIVENDDLTEIYYERENEYTLAGSIYNGRVTRVLPGMQSSFVDI
GLERDAFLYITDFMEEAGDSADFDTNGDHGKRADNRRRETPVTLEGATAAPSEESAARPE
RGDRGRDRGGRGRNDRRRGNRQPGSDTAQPLENPEAIVADFTPESDFGPHPDSLSAEPAD
TAEIGEGAPGADGSRRWRGRRGRRRGRPGQRDASVQPVNADAQSEFTAPDPEEQNESQYD
SPLDLEGAAERSTPRNSAPVPAAYPAPESATENTERRDRNGRNDRGDRGGRNDRGGRNDR
GGRDRDAGQRRTPRGFAPRTSLYGVDDAPSNESAGTDGPPPEPIVLPGESLSKYRKDGDQ
PQATAKTAEPTIILASSPGYEVPTGWDGGAILPGESLSRHRRPESRDSRQEPRAEHRSGS
QPSLRNDHQQQASISEAVEVPEAVEAEPIEQASVEQAHESTPPSEYEPTDASASYRVDPV
APSEFRQSAPTIEEPIEHHAEHIEEPAAHEFTAIHATGEMATEPPVAAFTPEPAIEPASP
IQHETVIANPAENAVEDGIEPVPQQFAPGAGELEEEVIEEEDYPTTLQASSIEEMDDLDE
EETLEGAADLGTMIREMSIDEITSSGNSVIEDDELEELEEEDSFDDGTHEYEEDLDESDV
SEEEDEADEEDGLIHEEGEHAAATGFDQSQTAPDQERPRDGDRGRSSRRDGARRDGRRGD
RSRGDRPRYTGGAGDRERSGGSRDRRGGRNSMQTTNLPAISELLKPGQEVLVQIAKEPIA
KKGARITSHIALPGRFLVFMPTVNHTGVSRKIESDSERRRLKEILLSEKGEASGGFIVRT
AASGASEEELRSDLRFLLNLWADIKQRSESSKSPALIYHDLNLVERILRDQVTDNFSAIW
VDTETEYERVLRFLQRFQPSLIRRVKLYTKETPLFEQFGITEEINKALRSKVWLKSGGSI
VINQTEALVAIDINTGKFVGKTARLEDTIVKTNLDAIPEIVRQIRLRDLGGIIIIDFIDM
DERKNRNRVMAALEEELKSDRAPSKVLQFNDFGLVAITRKRVKQSLERTLSTTCNVCVGT
GMVKSPVTVCNDIYVEMRKMQKHLDRGDVMLRVHPDVVKQLKSSTKWLQEMEEMVGKTIL
VKSDPSLHPEQFDIH
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagaaatttatatctcaagtacgccgcacgagacgcggcttgccatcgtcgaa
aacgacgacctcaccgaaatttattacgagcgcgagaacgaatataccctcgccggttcc
atctataacggacgcgtcacgcgcgttctgccgggcatgcagtccagttttgtggacatc
ggccttgagcgcgacgccttcctttacatcaccgacttcatggaagaagccggcgactcc
gcagacttcgacaccaacggcgaccatggcaagcgtgccgacaaccgccgccgtgagaca
cccgttaccctcgaaggcgcaaccgccgctccctctgaagaatccgccgctcgccccgag
cgcggtgaccggggccgcgaccgtgggggccggggccgcaacgaccgccgccgcggcaac
cgccagcccggctccgatactgctcagccgttagagaatcccgaagctatcgtcgccgac
ttcactccggagagcgacttcggccctcaccccgacagtctctccgccgaacctgccgac
accgccgagatcggcgaaggcgctcccggtgccgatggaagccgccgctggcgtggccgt
cgtggacgccgccgtggccgccccggtcagcgtgacgcctcagtgcagcctgttaatgcc
gatgcacaatctgagttcaccgctcccgatcccgaggagcagaacgagagtcagtatgac
tccccccttgacctcgaaggcgcagccgagcggtctactccacgcaactccgcgcctgtt
cctgccgcgtacccggcacccgaatcggcaacggagaacacggaacgccgcgaccgcaat
gggcgcaacgatcgtggagaccgcggtggacgtaacgaccgcggaggtcgaaatgatcgt
ggcggacgcgaccgcgatgctggccagcgccgtacccctcgcggctttgccccccggacc
tcgctctatggcgtggacgacgctccctccaacgagtcagcaggcacggatggcccacca
cccgagcccatcgtgctccccggcgaatcgctctcgaagtaccgcaaagacggcgatcag
cctcaggccaccgccaagacagctgagccgaccattatcctggcctcatcgcccggctat
gaagttcccaccggatgggacggcggagctattcttcccggcgaaagtctctcacgccac
cgccgcccggaatcccgtgactcccgtcaggaaccgcgcgctgaacatcgttccggctct
cagcccagccttcgcaacgaccaccagcagcaggccagcatcagcgaagcagtcgaggtt
cccgaagcagtcgaggccgagcccattgagcaggcgtctgtcgaacaagcccacgaatcc
acaccgccgtccgagtacgagcccaccgacgcctctgcctcctaccgcgtcgatcccgtc
gcgcccagtgagtttcgtcagagcgccccgacaatagaagagccgatagagcatcacgcc
gagcacatagaagagcccgcagcgcatgagttcaccgccatccatgccactggcgagatg
gctaccgagcctcctgttgcggcgttcacgcctgagccggcaatcgaacctgcttctccg
atccagcacgagaccgtcatcgccaatcccgccgagaatgccgttgaagacggcatcgag
ccggtacctcagcaattcgcgcccggcgctggggaactcgaagaagaagtcatagaagaa
gaggattaccccaccactcttcaggccagctccatcgaagagatggacgaccttgacgaa
gaggagaccctcgaaggcgccgcagacctgggcaccatgatccgcgagatgtctatcgac
gagatcaccagctccggcaacagcgtcatcgaagacgacgagcttgaagagctcgaagaa
gaagactccttcgacgacggcactcacgagtacgaagaagacctcgatgaatccgacgta
tccgaagaggaagacgaagcggacgaagaagacggcctcatccacgaagagggcgaacat
gccgctgctaccggcttcgaccaatctcagaccgcgcctgatcaggaacgtccgcgcgat
ggcgaccgtggccgaagcagtcgccgcgatggtgcccgtcgtgatggacgccgtggtgac
cgtagccgtggcgaccgcccccgctacaccggcggcgcaggcgaccgcgaacgcagcggg
gggagccgggaccgtcgtggcggacgcaactcgatgcagacgaccaatctgcccgcgatc
agcgaattgctgaagccgggccaggaggttctcgtccagattgccaaggagcccatcgcc
aagaagggtgcgcgcattacctcgcacatcgctcttcctggccgcttcctggtcttcatg
ccgacggtcaatcacaccggcgtctctcgcaagatcgagtccgacagcgaacgccgccgt
ctgaaggaaattctgctcagcgaaaagggtgaggcctcgggaggcttcatcgtccgaacc
gccgcgtcgggtgccagtgaagaagagctgcgcagcgatctccgcttcctgctcaacctc
tgggccgacatcaagcagcgctcggagtccagcaaatccccggctctcatctatcacgac
ctgaacctagtcgagcgcatccttcgcgatcaggtcactgataacttctctgccatctgg
gtcgacaccgagaccgagtatgagcgagtgctgcgattcctgcagcgcttccagccctcg
ctcatccgccgcgtcaagctctataccaaagagactcctctcttcgagcagttcggcatt
accgaagagataaacaaggcccttcgctcgaaggtgtggctcaaatccggcggcagcatc
gtcatcaaccagaccgaagccctcgtcgcgatcgatatcaacaccggcaagtttgtcggc
aagaccgcccgcctcgaagacaccatcgtcaagaccaacctcgatgcgattcccgagatc
gtccgtcagattcgcctgcgcgacctgggcggcatcatcatcatcgacttcatcgacatg
gatgagcgcaagaatcgcaatcgggtcatggccgccctcgaagaagagctcaagagcgac
cgtgccccatcgaaggttcttcagttcaatgactttggcctggtcgccatcacccgtaag
cgggtcaagcagtcgctcgagcgcaccctctccaccacgtgcaacgtctgtgtgggtact
ggaatggtcaagtctccagtcacggtatgcaacgacatctacgtcgagatgcgcaagatg
cagaagcacctcgaccgcggggatgtcatgctgcgcgtccatcctgacgtcgtcaagcaa
ctcaagtcttcgacgaaatggttgcaggagatggaagagatggtcggtaaaactatcctg
gtcaaatccgatcccagccttcaccccgagcagttcgacatccactaa
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