Elusimicrobium posterum: Dip510_000227
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Entry
Dip510_000227 CDS
T10993
Name
(GenBank) DNA topoisomerase-1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
epm Elusimicrobium posterum
Brite
KEGG Orthology (KO) [BR:
epm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
epm03032
]
Dip510_000227
03400 DNA repair and recombination proteins [BR:
epm03400
]
Dip510_000227
Enzymes [BR:
epm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Dip510_000227
DNA replication proteins [BR:
epm03032
]
Prokaryotic type
DNA Topoisomerases
Dip510_000227
DNA repair and recombination proteins [BR:
epm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Dip510_000227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
ADK_lid
Zn_Ribbon_TF
DUF7576
Ogr_Delta
Zn_ribbon_8
Toprim_4
DUF938
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
XRK14586
LinkDB
All DBs
Position
complement(226487..228778)
Genome browser
AA seq
763 aa
AA seq
DB search
MAKTETTTKAKKAVKNLVIVESPTKQKTISKILGNDYIVRSSFGHVRDLPSKEIGVDEKN
DFKPTYVPVEKAKKITAELSKAAKESDFVYLATDPDREGEAIAWHLVELLKIPAQKIRRI
FFHEITPTAVKASFEHARNINQNLVDAQQARRVLDRLVGYKLSPLLWKKITSGLSAGRVQ
SIAVRLLAERAKEIESFVQEDYYSLSADVEKAGVPPQFNARLYKWEGKTVEQTTTYHLFA
EDYKVKNTVFKNAESLAEANSILREGPLTVERVEKKEVKQRPKPPFITSSLQQDAHNKIG
FSSQKTMMTAQNLYEGIDIAGEIVGLITYMRTDSFNVSKQLQDQTKDFISEKYGDNFAPA
KPNVYKSKVKGAQEAHESIHPTDVYRTPASVKSFLTPDQFKLYELIWLRFVSSQMADAIF
NTVSIDISAKDKEKCLLRATGRTLKFAGYLSIYKDDEVDEDEEDPSSAILPEMEQGDKLA
LKDIITKAHKTAPPPNYNEASLIKALERHGIGRPSTYAPTIKTILDRKYIAKQPKTSKLV
ATTLGITVTDQLKDFFKDIMDLSYTAGVEEKLDDIAEGDIDWVKVIRDFYTGFKKELEEA
DKGMQRAAPRPSDEKCPECGSPMVVRRSRFGEYLACSRYPECKGKINLTNTGEKVEPEKT
NEVCDKCGSPLVIRSGRRGKFMACSAYPKCKNTFSIDAEGNKVASSGPLATKMACENCGK
PMVLRASKRGEFLGCSGYPKCKTIVSPTKEELEKIKAEAQEGK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaacagaaaccacaacaaaagctaaaaaagcagttaaaaatctggttattgta
gagtctcctacaaaacaaaaaaccataagcaagattttaggaaatgattatattgtcaga
agttcctttggccatgtaagggatttgccctcaaaagaaataggcgtggatgaaaaaaat
gattttaaacccacctatgtaccggtggaaaaagctaaaaaaattacggcggaattaagc
aaagccgcaaaagaatctgactttgtttaccttgctactgaccctgaccgcgaaggtgaa
gctatagcgtggcatttggtggaacttttaaaaatccccgcgcaaaaaataagaagaatt
ttctttcatgaaattacgcccacagccgttaaagccagctttgagcatgcccgcaatatt
aaccagaacttggtggatgcgcaacaggcacgccgtgtgctggacaggttggtaggttat
aaactttcaccgcttctttggaaaaagattaccagcggtctttcagctggccgcgtgcaa
agcatagcggtgcgccttcttgccgaacgcgcaaaagaaatagaaagctttgtgcaggaa
gactactactcattatctgctgatgttgaaaaggccggcgttcccccgcagtttaacgcg
cgtctttataaatgggaaggtaaaactgttgagcagacaacaacctatcatttatttgcg
gaagattataaagtaaaaaacacagtttttaaaaacgccgaaagtctggccgaggcaaac
tcaattttacgtgaaggcccgcttacagttgaacgcgttgaaaagaaagaagtaaaacaa
agacctaaaccgccgtttattaccagttcacttcagcaggacgcgcacaataaaataggt
ttttcttcacaaaaaaccatgatgaccgcgcagaatctttatgaaggtatcgatatagcg
ggtgaaattgtcggtcttatcacttatatgagaacggactcttttaacgtctcaaaacaa
ttgcaggaccagaccaaagattttatttctgaaaaatatggtgacaattttgcacctgcc
aaacctaacgtttacaaaagtaaagttaaaggcgcgcaggaagcgcatgaatccatccat
cctacggatgtttacagaactcctgccagcgttaaatcatttttaacgccggaccaattt
aaactttatgaacttatttggctgcgttttgtttccagccagatggctgacgctatcttt
aatacggtatcaatagatatttcagccaaagacaaagagaaatgtcttttaagggcaacc
ggcagaacattaaaatttgcgggttatttgtcaatttataaagatgatgaagttgatgag
gacgaagaagatccgtcatcagctattttgccggaaatggaacagggcgataagcttgcg
cttaaggatattattacaaaagcgcacaaaaccgccccgccgccaaattacaacgaagcc
agccttattaaagcgttggaacgccacggcattggccgcccgtcaacttacgcgcccaca
attaaaactattctggaccgtaaatatattgccaaacagcctaaaacaagtaaacttgtg
gcaacaactttgggcataacggtaacggaccagcttaaagatttctttaaagatattatg
gatctttcttacaccgcaggcgtggaagaaaaactggacgatatcgcagaaggcgatatt
gactgggttaaagtaataagagatttttacacaggctttaaaaaagagcttgaagaggcg
gacaaaggcatgcagcgcgccgcccctcgcccgtcggacgaaaagtgccctgaatgcggc
agcccgatggtggtaagaagaagcagatttggcgaatatcttgcatgttcaagatatccc
gaatgtaaaggaaaaatcaacctgactaatacgggggagaaagtggaacctgaaaaaaca
aatgaagtttgtgataaatgcggaagcccgttggttatccgcagcggcagaagaggcaaa
tttatggcctgttcagcctacccgaaatgtaaaaatacattttctattgacgccgaaggt
aataaagtagcttccagcgggccgcttgccacaaaaatggcttgtgaaaactgtggtaaa
cccatggttttacgcgcaagcaaacgcggtgagtttttgggctgcagcggttaccccaaa
tgtaaaacaatagtttcacctactaaagaagaacttgaaaaaataaaagctgaagcgcag
gaaggcaaataa
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