Elusimicrobium posterum: Dip510_000386
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Entry
Dip510_000386 CDS
T10993
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
epm Elusimicrobium posterum
Pathway
epm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
epm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dip510_000386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
epm03021
]
Dip510_000386
03400 DNA repair and recombination proteins [BR:
epm03400
]
Dip510_000386
Enzymes [BR:
epm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dip510_000386
Transcription machinery [BR:
epm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dip510_000386
DNA repair and recombination proteins [BR:
epm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dip510_000386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Peptidase_M23
BSH_YknX
AIM3_BBC1_C
Motif
Other DBs
NCBI-ProteinID:
XRK14745
LinkDB
All DBs
Position
complement(399372..403547)
Genome browser
AA seq
1391 aa
AA seq
DB search
MQDKTKKLKKLDELNFFDFDAIKLGIASPEQIMAWSHGEVKKPETINYRTLKPERDGLFC
ERIFGPTKDYECSCGKYRWVKYKGMQCDRCGVEITEAKVRRERMGHLELAVPVAHVWFLR
KNPSRIGIMLDMRTTDLERVVYYASYVVVEDCVDSITGRTDFKKGELLTDVQVREARKKH
GARLKVDIGAPAIKKLLSDIDFDKEIPALHTQLAETHSELERTKLVRRIKTMEEFKTSGN
RPEWMILSVLPVIPPDLRPLVPLDGGRFAASDLNDLYRRIINRNNRLKHIESLRAPEVMI
YNEKRLLQEAVDALIENGARGKFFIGAGGRPLKSLSDVIKGKHGRFRQNLLGKRVDYSGR
SVIVVGPSLKLHQCGLPKLMALELFKPFIIGELMKKEGVTLKAAKKMLERVRPEIWDILE
QVTKHHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLTCAAFNADFDGDQMAVHVPLS
LEAQLEARTLMLATNNILSPASGRPIAAPSHDMVVGVSFLTRVKANDFGEGNIYESKEDA
LLAYEYGKVSLHAKIKVRGLNSIKEEGLTDETLKDAKNWKDFTSVGRIIFNDNMPEGWPY
INAPVGKKELAAIVDECYKSKKYGKYETVQLLDRIMKMGYNYATRSGLSISIADMIIPQV
KQKYIDSAKKKIKEIQNQAESGIITEGERYNKVIDIWTRVTDDVAVELFKEMKKFEDTPY
SGKGQRFNSVFLMADSGARGSRQQVRQLAGMRGLMAKPQKKLTGGQGEIIESPITANFRE
GLSVLEYFISTHGGRKGLSDTALKTAEAGYLTRRLVDVGHNLVVTEIDCGTSNGIAVTSL
TSGDEMVEPIEERILGRTSLEDVVVRVKKADGSEEDKTIIKEGDSITLEQAKQVKKHGVS
SVRIRSVLTCEAKTGICSKCYGQSLATGAMSNVGDSVGIIAAQSIGEPGTQLTLRTFHIG
GTASRVLSHSQAVAEIAGKVTFKDIKVITNRFDDKVCISRNGSIFVEDAKGTIKEYKIQY
GATLRVADKANVEKGSLMAEWDPHSIPVLAEAPGLVRLQDVSEGITLQEERNKVTGVIER
KITASRMGKKNPRIVVEGKDGKKLGLPLPIDTILLVESGEEVEAGDILAKIGREVGGTKD
ITSGLPRIAELFEARKPRNAAIMSEFAGVVSLETSPKGLIEIVVRNEETGQIKQYAVPQG
KHLVVYEGDHVAAGEALTDGAIDPHDVLRVKGTKEVQEFLLNAIQEVYRLQGVTINDRHI
EVIVRQMLGNVRIQDAGDTQFLKGEVISRLTLQKENEKIEKAGKRIAIAEPILLGISKAS
LASDSFISAASFQETTKVLTDAAITGQVDTLQGLKENVIVGHLIPAGTGISARAFAQDFE
ESRKAAEAAKK
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataaaacaaaaaaactaaaaaagcttgatgaattaaacttctttgactttgac
gctattaaactgggcattgccagcccggaacagattatggcgtggtctcacggcgaagtt
aaaaagcctgaaactatcaactaccgcacccttaaaccggaacgcgacggcttgttctgc
gaacgtattttcggccctacaaaggactatgaatgttcctgcggcaaataccgctgggtt
aaatacaaaggtatgcagtgtgaccgctgcggcgttgaaattacagaagccaaagtaaga
cgcgaacgcatgggccatttggaacttgcggtacccgtggcgcatgtttggttcctgcgc
aaaaacccgtccagaatcggcattatgctggacatgagaacaacagatcttgaaagagtt
gtctattacgccagctacgttgttgttgaagactgcgtggacagcattacaggcagaaca
gactttaaaaaaggcgagcttcttacagacgttcaagttagagaagcccgtaaaaaacac
ggcgcccgccttaaagttgatatcggcgcgcccgctatcaaaaagcttctttcagatata
gattttgataaagaaattcccgctttgcatacacagcttgctgaaacacattcagagctt
gaacgcacaaaattagtgcgccgtatcaaaacgatggaagaatttaaaaccagcggcaac
agacccgaatggatgattttatccgttctgcccgttatcccgcctgatttaagaccgtta
gttccgcttgacggcggacgctttgcggcctcagatcttaacgatttgtacagaagaatt
attaaccgcaacaaccgcttaaaacatattgaatccttaagagcgcctgaagttatgatt
tataacgaaaaacgccttttacaggaagctgttgacgcccttattgaaaacggcgcgcgc
ggcaaattctttatcggcgccggcggcagaccgcttaaatccctttcagacgttattaag
ggtaaacacggccgcttccgccaaaacttgctgggtaaacgcgttgactattcaggccgt
tcagtcatcgttgtaggtcccagccttaaactgcaccagtgcggtttacccaagcttatg
gctttggaacttttcaaacccttcatcattggcgaacttatgaaaaaagagggtgttacc
cttaaagccgccaagaaaatgttggaacgcgtcagaccggaaatttgggatattttagaa
caagtaaccaaacatcacccggttatgttaaaccgcgcgcctacacttcacagattaggt
attcaggcttttgaacctgtacttattgaaggtaaagctatacagctgcatccgttaacc
tgcgccgcttttaacgctgacttcgacggtgaccagatggccgttcacgttcctctgtca
cttgaagcgcagcttgaagcacgcacattgatgcttgcgacaaacaatattttatcaccc
gccagcggcagacctatagccgccccgtcacatgacatggttgtgggtgtaagcttttta
acaagagtaaaagccaatgactttggcgaaggcaatatttatgaaagcaaagaagacgct
ttacttgcttatgaatacggtaaagtttcacttcacgccaaaatcaaagtccgcggttta
aacagtattaaggaagaaggtcttacagacgaaacgcttaaagacgctaaaaactggaaa
gactttacctccgtgggccgcattattttcaatgataatatgcccgaaggctggccttat
atcaacgcgcccgttggcaaaaaagaacttgccgctatagtggacgaatgttataagagc
aaaaaatacggtaaatatgaaaccgtgcagctcttggacagaatcatgaaaatgggttac
aattacgcaacccgctcaggtctttctatctccattgcggatatgattatcccgcaggtt
aaacagaaatacattgattctgctaaaaagaaaattaaagaaattcagaaccaggctgaa
tcgggcatcatcacggaaggtgaaagatataacaaagttatcgatatctggacccgcgtt
acagacgatgttgccgttgagctttttaaagaaatgaaaaagtttgaagatacgccttat
tcaggcaaaggccagcgctttaactcagtctttttaatggctgactcaggcgccagaggt
tcaagacagcaggtaagacagcttgccggtatgcgcggccttatggctaaaccgcagaaa
aagctgaccggcggccagggtgaaattatcgaatcacctattaccgctaactttagggaa
ggcttgtcagtacttgaatactttatttccactcacggtggacgtaaaggtctttccgat
acagctttgaaaaccgctgaagccggttacttaacccgccgtttagttgacgtaggccat
aacctggttgttacggaaattgactgcggaacaagcaacggtattgcggtaacttcgctt
accagcggcgacgaaatggttgaacccattgaagaaagaattttgggccgcaccagctta
gaagatgttgttgtaagagttaaaaaagctgacggcagtgaagaagacaagacaattatt
aaagaaggcgacagcattactcttgaacaagccaaacaggttaaaaaacacggtgtgtcc
agtgtgcgcatccgttcagtacttacctgtgaagcaaaaaccggtatctgttcaaaatgt
tacggacagagcttggctacaggcgcaatgtccaatgtgggtgattcagtgggtattatc
gccgcgcagtcaattggtgaaccgggcacgcagcttacgcttcgtaccttccacatcggc
ggtaccgcgtcacgcgttcttagccattcacaggcggttgcggaaattgccggcaaggta
accttcaaagatattaaagttatcacaaacagatttgatgataaagtctgtatttccaga
aacggctctatttttgtagaggacgccaaaggaacaattaaagaatataaaatacaatac
ggcgcaaccttacgcgtggctgataaagccaatgttgaaaaaggttcgcttatggctgaa
tgggatccgcactcaatacctgtgttggcggaagcccccggtcttgtcagactgcaggac
gtttctgaaggtattacactgcaggaagaaagaaacaaagttaccggcgttattgaacgt
aaaattacagccagccgcatgggtaaaaagaacccccgtattgttgtagaaggcaaagac
ggtaaaaaattgggcttacctttacctattgatacaatcttattggttgaatcaggtgaa
gaagttgaagcgggtgacattcttgcaaaaatcggccgtgaagtgggcggtacaaaggat
attaccagcggtctgcccagaatcgcggaacttttcgaagcccgcaaaccgcgcaatgcc
gctattatgtcagaatttgccggcgtagtcagtcttgaaacatcacccaaaggtcttatt
gaaattgtggtgagaaacgaagaaaccggccagattaaacagtacgctgtgccccagggt
aaacatttagttgtttacgaaggtgaccatgttgccgcaggtgaagcgcttacagacggc
gccattgacccgcacgacgtgcttagagttaaaggtacaaaagaagtacaggaattcttg
cttaacgccattcaggaagtttacagacttcagggcgttacgattaacgacagacacatt
gaagttatcgtccgccagatgttaggcaacgtaagaattcaggacgcgggcgacacccag
ttcttaaagggtgaagtcatcagccgccttactttacagaaagaaaatgaaaaaattgaa
aaagcgggcaaacgtatcgcaattgcggaacctatcctgcttggtataagtaaagcgtca
ctcgcgtctgattcattcatatccgcggccagcttccaggaaacaacaaaagttttaacg
gatgctgccattacaggccaggtagatacactgcagggtcttaaagaaaacgttatcgtc
ggccacttgatacccgcgggtacaggtatttccgccagagcgtttgcgcaggattttgaa
gaatcaagaaaagctgctgaagcggctaaaaaataa
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