Elusimicrobium posterum: Dip510_000387
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Entry
Dip510_000387 CDS
T10993
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
epm Elusimicrobium posterum
Pathway
epm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
epm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dip510_000387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
epm03021
]
Dip510_000387
03400 DNA repair and recombination proteins [BR:
epm03400
]
Dip510_000387
Enzymes [BR:
epm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dip510_000387
Transcription machinery [BR:
epm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dip510_000387
DNA repair and recombination proteins [BR:
epm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dip510_000387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
DUF8315
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
XRK14746
LinkDB
All DBs
Position
complement(403565..407374)
Genome browser
AA seq
1269 aa
AA seq
DB search
MIKQNNFGKISSKLQLPDLLEMQKQSFVDFLQLDVPASKRDLKGLQAAFEDVFPIEAPDG
SMKLEFVKYELCPPRYSTPSQAILRDGTYSAPLKAVMRLSVKKRDGKLKEASEQDVTLCD
LPLMTDAGCFVFNGAERVVVSQLHRSPGIIFEDDEEKKQSTLGKKLYVARIIPYRGAWIE
FSFDLMNALWVRIDRKKKVLATTFLRACGLETNAQILQAFYNVEDVEVKPAEIDNIVGRY
AADDIADASTGEVLWNLDDKAAMPIDDKLFKELVDRKIKKIKLIAGNPRQDDPGILATLE
NRKDQIKTSKEAQAEIYKKMRGQDFVVKEQAETFLDNLIFDNIRRYDLSYVGRYKINKKF
DFLFSIIDKLKFKKFTTPTDKRRTLSPEDIIVTVKYLLALNAGEDAQKMYGDEVIFKTDD
IDHLGNRRVRGIGELLENQIRVGLSQMAKTARDRMNKELTSHTPRALVNAQPVQAIIRKF
FGTSQLSQFMDQINPLSELTHKRRLSALGPGGLNRKRAGFEVRDVHHTHYGRVCPIETPE
GPNIGLITSLACYAKINQYGLIETPYRKVNDSKVTDKVEYLTADQEDDLMVAQSNTPLGN
NGKLDTDMVYCRVRSDYPIVAPTEVDYMDVSPLQVISVSAALIPFLEHDDANRALMGCNM
QRQGVPLLLTDAPLVGTGIEYEVAKDSGSTITASRAGKVIFSSADMVVIEPDAGGAEDIY
ELIKYKRSNQDTCINQRPLVRRGDHVKKGDVLADGPAMDNGLLALGRNLLVGFMSWEGYN
YEDAILVSHKLVKEDVFTSIHLHEFSIDARNTKLGAEEITRDIPNIGAEALAHLDADGII
IPSTVVEPGDILVGKVTPKGEQQLTPEERLLKVIFGKKADDVVDASLRVPPGTSGKIIGT
RVFVRKEKLTKAEEKARVKAIEDDKNQKLDMIREQRKIALEHAKTSGKDAKKEEDRTNTF
YKRLEKKVLEDFEREMEFSRQGDELAVTVNKSVKVFIASKRKLMVGDKLSGRHGNKGIVA
KILPEEDMPFMPDGTPLDIVLSPLGIPSRMNVGQLFETMLGWSAKNLGYNAATPVFDGPT
EEAVIEEVRKAKKALMEKGVPEKHLPDDYCRITLYDGRTGQPFDEKVTIGYMYIMKLIHL
VEDKVHSRSTGPYSLITRQPLGGKAQFGGQRFGEMEVWAIEGYGATYTLQEFLTVKSDDF
AGRTKMYEAIVRGEAPQQPGVPESFKVLVKELQALGLSVELLKDNKEQEIEEMSVASKAE
AVEAEDAAI
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaaaacaatttcggtaaaatttcttccaaactacagctgcctgatttgtta
gagatgcaaaaacagtcattcgttgactttttgcagcttgacgttccggcatctaaaagg
gatttaaaaggtcttcaggccgcttttgaagacgtgttccccatagaagcaccggacggc
agcatgaagcttgaattcgtaaaatacgaactctgccctcccagatattccacgccctca
caggcaattttaagagacggcacctacagcgcccctttaaaagcagttatgcgcttgtcc
gtcaagaaaagagacggtaaattaaaagaagcctcagaacaggacgttacgctctgtgac
cttcctttaatgacagacgcaggttgctttgtttttaacggcgcggaacgcgttgttgtc
agccagttacaccgttcacccggtatcatttttgaagatgatgaagaaaaaaagcagtca
acattaggtaaaaaactctacgttgcgcgcattattccttacagaggcgcgtggatagaa
ttttcctttgaccttatgaacgcgttatgggtccgcatagaccgcaagaaaaaagtgctt
gccacaacattcctgcgcgcctgcggccttgaaacaaacgcccagattttacaggctttc
tataatgttgaagatgttgaagttaaacccgctgaaattgacaatatagtaggccgctac
gcagctgatgatatcgcagacgcttccacaggcgaagtcctttggaaccttgacgataaa
gccgccatgcctattgacgacaagctttttaaagaacttgttgacagaaaaatcaaaaaa
attaaacttatcgccggtaaccccaggcaggatgaccccggtattttggccacattagaa
aatagaaaagaccagattaaaacatcaaaagaagcccaggcagaaatttacaaaaaaatg
cgcgggcaggatttcgttgttaaagaacaggctgaaaccttccttgacaacttaattttt
gacaatatccgcagatatgacctgagctatgttggccgttacaaaattaacaaaaaattt
gactttcttttcagcataattgacaagctcaaatttaaaaaattcacaacacctacagac
aaacgcagaacattatcacctgaagatattatcgtaacagttaaatatctcttggcctta
aacgccggtgaagacgcgcagaaaatgtatggtgatgaagttatttttaaaacagacgat
attgaccacttaggcaacagacgcgtaagaggcattggcgaattattagaaaaccagatc
cgcgttggtctgtcacaaatggccaaaaccgccagagacagaatgaataaggaattaact
tcccacacaccgcgcgctttggttaacgcccagccagttcaggctattataaggaagttc
tttggtacatcacagctttcacagttcatggaccaaatcaaccccttgtctgaacttacg
cacaaacgcagactttctgctttaggccccggcggtcttaacagaaaaagagcaggcttt
gaagtgcgtgacgttcaccatacacattatggccgcgtctgcccaattgaaacgcctgaa
ggtccgaacatcggtcttattacttcactggcctgttacgctaaaatcaaccagtacggt
ttgattgaaacgccttacagaaaagttaatgattcaaaagtaacagataaagttgaatat
ttaacagctgaccaggaagacgatcttatggtagcccagtccaacacgccgcttggcaac
aacggtaaattggacacagatatggtttactgccgtgttagaagtgactatcctatcgtc
gctcctacagaagttgactatatggacgtttcacccttgcaggttatcagcgtttcagcg
gctttaataccattccttgaacatgacgacgctaaccgcgccctcatgggttgtaacatg
caacgccagggcgtacccttacttttaactgacgctcctttagttggtacaggtattgaa
tacgaagtcgctaaagactccggttcaaccattaccgcaagcagagcgggtaaagttatc
ttctcctcagccgacatggttgttattgaacctgacgccggcggtgcggaagatatttac
gaacttattaaatacaaacgctccaaccaggatacctgtattaaccagcgcccgttagta
agacgcggtgaccatgttaaaaaaggcgacgtgcttgccgacggccccgctatggacaac
ggtcttttggccttgggcagaaacctgttagttggttttatgagctgggaaggctataac
tatgaagacgctatcttggtctcccacaaattagtaaaagaagacgtttttacatcaatt
cacttgcatgagttcagcattgacgcaagaaatacaaaactgggcgcggaagaaattacc
agagacatccccaatataggcgcggaagcattagcgcatttggacgctgacggtattatt
atcccctccacggttgttgaaccgggcgatatcttagttggtaaagttacccctaaaggc
gaacagcagcttacgccggaagaaagactgttaaaagtcatcttcggtaaaaaggctgac
gacgttgtggacgcttcacttcgtgttcccccgggcacaagcggcaagattatcggcaca
agagtttttgtaagaaaagaaaaacttaccaaagctgaagaaaaagcaagagttaaagct
attgaagacgataaaaaccagaagcttgatatgattagagagcagcgcaaaatcgcgctt
gagcatgccaaaacttccggtaaagacgccaaaaaagaagaagacagaacaaatactttc
tacaaaagacttgaaaagaaagtgcttgaagattttgaaagagaaatggaattctcaaga
caaggtgacgaacttgctgttacagttaacaaatccgttaaagtgtttatcgcaagcaaa
cgcaagctgatggtgggtgacaaattgtcaggccgccacggtaacaaaggtattgtggca
aaaattcttcctgaagaagatatgccctttatgccggacggcacaccgcttgatatcgtg
ctttcacctttgggtattccttcccgtatgaacgtaggccagttgtttgaaacaatgctg
ggctggtcagccaagaacctcggttacaacgctgccacacctgtatttgacggacctacg
gaagaagctgttatagaagaagtacgcaaagccaaaaaagcgttaatggaaaaaggcgtg
cctgaaaagcatttgcccgatgactattgccgcattactctttacgacggcagaaccggc
cagccttttgatgaaaaagttaccatcggttacatgtatatcatgaaacttatccatttg
gttgaagacaaggttcactcacgttccacagggccgtacagcttaattacaagacagcct
ttgggcggtaaagcccagttcggcggacagagattcggtgaaatggaagtttgggccatt
gaaggttacggtgcaacttatacattacaggaattcttaacagtcaaatccgacgacttc
gcaggcagaaccaaaatgtatgaagctattgtacgcggtgaagcgccgcagcagccgggc
gtacctgaatcctttaaagttttagttaaagaacttcaggcgctgggtctgagcgtggag
ctccttaaggacaataaggaacaagagattgaagaaatgtccgtcgcctctaaagcagag
gctgtagaagcggaagacgctgctatctaa
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