Elusimicrobium posterum: Dip510_001905
Help
Entry
Dip510_001905 CDS
T10993
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
epm Elusimicrobium posterum
Pathway
epm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
epm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dip510_001905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
epm03019
]
Dip510_001905
03400 DNA repair and recombination proteins [BR:
epm03400
]
Dip510_001905
Enzymes [BR:
epm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dip510_001905
Messenger RNA biogenesis [BR:
epm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dip510_001905
DNA repair and recombination proteins [BR:
epm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dip510_001905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
XRK16264
LinkDB
All DBs
Position
1935560..1937371
Genome browser
AA seq
603 aa
AA seq
DB search
MKTSRTPLEILNKVYGYSSFIGLQEPVIENIMQGKSALILMPTGGGKSLCYQIPALCMKG
TAVVISPLISLMHDQVTALKELGIKAAALNSMLDFEESYYTERDIVNGELDLLYVSPERV
VTPKFLDILNKINVALFAIDEAHCISEWGHDFRPEYAQLSTLRDLFPSVPVLALTATADE
VTRKDIIKNLKIADSQIFISSFDRPNIEYTITPKETEKKQLLDFIKTKHHTDSGIVYCLS
RKRTESVAEFLREKGYNALVYHAGLSKDTREKNQNRFIKEDNIIMVATNAFGMGINKPNV
RFVAHMDLPKSIEAYYQETGRAGRDGLPADAWMVYGIKDIVLLRNFIESSGADEKQKRIE
HIKLNALVAYAETTQCRRHILLKYFGQQHKNNCEGCDNCITPPVTYDATVDTQKFLSCIF
RAGREGFSFGAGHIIDILMGKESEKIKKFGHDKLSPFAIGKDVSEAQWKTLSRQIIITGL
AEVDAEHSTLSLSPAARAVLKGEQKVEFRKHVLMPKKKGEKKSKKSNILETEADNILLDK
LKVFRRALAEKENIPSYIVFSDKSLIDMAVRKPKTMGEFADINGVGEFKLAKYGEMFLAE
INS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaagacctcaagaactcctttagaaatccttaataaagtttatggctacagctcattt
ataggcttgcaggaacctgtgatagaaaatattatgcagggcaaaagcgcgcttattctt
atgcctacgggcggcgggaaatcactgtgttaccaaattcccgcgctttgtatgaaaggc
accgctgtggtaatttcccccttaatttcacttatgcatgaccaggttaccgcgctaaag
gaactgggcataaaagcggccgcgttaaactcaatgcttgattttgaagaatcttattat
acggaaagggatattgttaacggggaattagatttactttatgtctcgccggaaagggtt
gtaacgccaaaatttttggatatattaaataaaatcaatgtagcgctttttgctattgac
gaagcgcactgtatttcagaatgggggcatgacttccgcccggaatacgcgcagctttca
acactgcgtgatttattcccttccgtacccgtgcttgcgcttaccgcaacggctgatgaa
gttacaagaaaagatattataaaaaaccttaaaattgcggattcccaaattttcatatca
agctttgacaggccaaatattgaatacacaataacaccaaaagaaacagaaaaaaaacag
ctgctggactttataaaaaccaaacatcacacggacagcggcattgtatactgcctgtca
agaaaacgtacagaaagcgtggctgagtttttgcgggaaaaaggttacaacgcgctggta
taccatgccgggttatccaaagataccagagaaaaaaaccaaaacagatttattaaagaa
gacaatattataatggtggctacaaacgcttttggcatgggtataaataagccaaacgta
cgttttgtggcgcatatggacctgccaaaaagtatagaagcttactatcaggaaacgggg
cgcgcgggaagagacggcctgcctgccgacgcctggatggtttacggtataaaagatatt
gttcttttaagaaattttattgaaagctccggcgcggatgaaaagcaaaaaagaattgaa
catataaaacttaacgcgcttgtagcttatgcggaaaccacgcagtgcagaaggcatatt
ctgcttaaatactttggccagcagcataaaaataattgcgaaggctgtgacaattgcata
accccgcccgttacttatgacgccacggtagatacgcaaaaattcctttcctgcattttc
cgcgcggggcgtgaggggttcagctttggcgcggggcatattattgatattttgatgggt
aaagaatctgaaaaaataaaaaaattcgggcatgataaactgtcaccttttgctataggc
aaagatgtaagcgaagcgcagtggaagacgctttcacgccaaataataataaccggcctt
gccgaagttgacgcggaacattccacactctcactctcccccgccgcccgcgcggtactt
aagggcgagcaaaaagttgagtttagaaaacacgttcttatgcctaaaaagaaaggtgag
aaaaaatctaaaaaatcaaatatacttgaaactgaagccgataatatactgctggataaa
cttaaggttttcaggcgcgcactggcggaaaaagagaatataccttcctacattgtattt
agtgataaatcactcatagacatggctgtgcgtaagccaaaaaccatgggtgaatttgca
gacataaacggcgtgggtgagtttaaacttgcaaaatacggtgagatgtttttggcggaa
attaacagctag
DBGET
integrated database retrieval system
