Endomicrobium proavitum: Epro_0259
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Entry
Epro_0259 CDS
T03965
Symbol
recJ
Name
(GenBank) putative Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
epo
Endomicrobium proavitum
Pathway
epo03410
Base excision repair
epo03430
Mismatch repair
epo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
epo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Epro_0259 (recJ)
03430 Mismatch repair
Epro_0259 (recJ)
03440 Homologous recombination
Epro_0259 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epo03400
]
Epro_0259 (recJ)
DNA repair and recombination proteins [BR:
epo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Epro_0259 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Epro_0259 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Epro_0259 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AKL97638
UniProt:
A0A0G3WH32
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All DBs
Position
320630..322654
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AA seq
674 aa
AA seq
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MVLENEKNWKLPKENFAAISEIAQKLNINAKIASVLFNRGIDTFYKMKVFLFGGLETLHN
PFLFEDIRIAVERIKKAVDAREKILVYGDRDVDGITAVNIIVNTVKALGGITEWYVPADE
GYGIHKDILSKYASDGVKLLITVDCGISAFDEIEYAKTLGMDVILTDHHEPPYEGVPKAL
AVIDPKTYDSKYPFKDIAGCVVALKTMQALIFSYAKDYDKDILLCHGENNASGFSGEYIL
VRNGLESEKKYFVSEQELRRIIRDSYRAYFDNKELKDFFVKNDALLNDKITVFDCLGVEN
VFEAYKVKRFSDDEKLSKFFRDNLDLCALGTIADSMPLTGENRTIVREGLKILDAAPDAK
PGLGLLIEDTLTSKNLKTLNARVVSWNITPVLNSSGRMGRGSLSAQFLMTRDLFQAKNLY
ADIVKLNEDRKGLQSENIERFNTLLTQQCNPKDDKVLIIDASNMEHGVTGIVASQMVKTY
LKPAFLLITNGAEATGAARSVEGFDIVAALESVKDILVKYGGHSQAAGFTVEHSKIGEFK
RRIYEYADKNFNCSSKKDEIIIESELKISDISADFFKQLEILEPFGMGNVRPVFWIRGLS
ATEVSVFGVRNEHLRFKVSHKGSKNVQAVFWNNADFANFVRAENLMDIVFNLDVIGKDDK
EKVQLNVIDIKSSY
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggttttagaaaatgaaaaaaactggaaattgccgaaagaaaatttcgcggcaatttcc
gaaatagcgcaaaaacttaacattaacgctaaaatagcgtcggtgctctttaacagaggc
attgatactttttataaaatgaaagtttttcttttcggcgggcttgaaactcttcacaat
ccgtttttgtttgaagacatacgcatagccgttgagagaataaaaaaagccgtggacgcg
cgcgagaaaattcttgtttacggagaccgcgacgttgacggtattaccgcggttaatatt
atagtaaataccgtaaaagctctcggaggcataacggaatggtatgtgcctgccgacgaa
ggttacggaatacataaagatattttaagcaaatacgcttccgacggcgttaaacttctt
ataaccgtagattgcgggatttctgcttttgatgaaattgaatatgccaaaactttaggc
atggatgtaattcttaccgaccatcacgaacctccgtatgagggcgttcctaaagctttg
gctgtaatagaccctaaaacttacgattctaaatatccgtttaaagatattgcgggctgc
gttgtggctttaaaaactatgcaggcgcttattttttcttacgcaaaagattacgataaa
gatattcttttgtgtcacggagaaaacaacgcttcggggttttcgggcgaatatattttg
gttcgcaacgggcttgagtcggaaaaaaaatattttgtcagcgagcaggaattaaggcgt
atcataagggattcttacagagcgtattttgacaacaaagagcttaaagatttttttgta
aaaaacgacgcgcttttaaacgataaaataaccgtttttgactgcttgggagttgagaat
gtttttgaagcttacaaagttaaaaggttttcggacgacgaaaaattaagtaaatttttc
agggataatttagacctatgcgctctcggcacaatagcggattcaatgcctcttaccggc
gagaacagaactatagtaagagaaggtttgaaaattcttgacgccgcgcccgacgcaaaa
ccgggcttgggtcttttgatagaggacacgttaacttctaaaaatttaaaaacgcttaac
gcaagagttgtgtcgtggaacattactccggtgcttaattcttccggaagaatggggcgc
ggctctctttccgcgcagtttttaatgacgagagatttatttcaggctaaaaatctttat
gcggatattgttaaacttaacgaggacagaaaaggtttgcagtctgaaaatattgagcgc
tttaacactcttttaacgcagcagtgcaatcccaaagacgataaagttttaataatagac
gcttcaaatatggaacacggcgttaccggtattgtggcgtcgcaaatggtgaaaacttat
ttaaagccggcgtttcttcttattaccaacggagccgaagctacgggcgccgcaagatcc
gttgaaggctttgacatagttgcggctttagagagcgtgaaagatattcttgttaaatac
ggcggacattcgcaggctgccggttttaccgtggagcattctaaaataggcgaatttaaa
agaagaatttatgaatacgccgataaaaattttaactgttcgtctaaaaaagacgaaata
ataatagagagcgagcttaaaatttcagacataagcgcagacttttttaaacagcttgaa
attttagaacctttcggcatgggcaacgttcgccctgttttttggataaggggtttaagc
gctacggaagtttctgtttttggcgttagaaacgagcatctgcgttttaaggtttcccat
aaaggttctaaaaatgttcaggcggttttttggaataacgcggattttgcaaattttgtg
cgcgcggaaaatcttatggatatagtttttaatcttgacgttataggcaaagacgataaa
gaaaaagttcagctgaacgttatagatataaaatcatcttattaa
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