Endomicrobium proavitum: Epro_0303
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Entry
Epro_0303 CDS
T03965
Symbol
uvrB
Name
(GenBank) excinulease of nucleotide excision repair, DNA damage recognition component
KO
K03702
excinuclease ABC subunit B
Organism
epo
Endomicrobium proavitum
Pathway
epo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
epo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Epro_0303 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epo03400
]
Epro_0303 (uvrB)
DNA repair and recombination proteins [BR:
epo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Epro_0303 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Epro_0303 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
HEM4
AAA_22
DUF2963
Kinesin
AAA_30
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AKL97682
UniProt:
A0A0G3WIH7
LinkDB
All DBs
Position
391593..393611
Genome browser
AA seq
672 aa
AA seq
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MEKFKLVSKFKPSGDQPAAIEQLVKNYNGGVNSQVLLGVTGSGKTYVMANVIEKLQKPTL
IIEPNKILAAQTYAEFKSFFPNNAVEYFISYYDYYQPEAYIPSSDTYIEKDSSINDHIDR
LRLKATTSLLERKDVIVVASVSCIYNLGSPKDYQNMCVEIIVGGEKSRDTIIKELVAVHY
ERNEIEFIRGKFRVKGDTVEIFPAYLETAIRVDFFGDDIESIKEFNPLTGEIIAKKTKAY
IYPAKHFVTTQPKIDNALGTIKAELDERLALLNSQKKLLEAQRLEQRTKYDMEMLRETGF
CSGVENYSRHLSGNPAGTRPTTLIDYFLQDNNDFLMIADESHISLPQIRGMYEGDRSRKQ
TLVDFGFRLPSALDNRPLKFPEFEKLIRKFMMVSATPGAYELERSKKNITDLVIRPTGLI
DPEVVIRPINGQIQDLMQEIQKTVDKKERTLVTTLTKKMAEDLAGYLKEKGFKVEYLHSE
IETLDRIEILKNLRLGKFDVLVGINLLREGLDLPEVSLVAVLDADKEGFLRSESTLIQIC
GRAARNVNGHVLFYADTMTGSMQRALQEMRRRRDRQIEYNVKNRITPKSIIKAVHDLDEF
QNISRAENTAAMLREDGFDYKITPKNIDKVISEIEESMKEAADNLDFESATVLRDRMIEL
KSMKSSKKKIKQ
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatttaaattagtttctaaatttaagccttcgggcgatcagccggcggcaata
gaacagcttgttaaaaattataacggcggagtgaattcgcaggtgctgctgggcgttacc
ggttccggtaagacttatgtaatggcgaatgtcattgagaaattgcaaaagcctacgctt
ataatagagccgaataaaattttggcggcgcagacttacgccgagtttaaatcttttttt
ccaaataatgccgtggagtattttatttcttattacgattattatcagccggaagcatat
attccgtccagcgacacttacatagaaaaagactcttcaataaacgatcacatagacaga
cttcgtttgaaagctaccacttctctgcttgaaaggaaggatgtaattgtcgtggcgtcg
gtgtcttgcatttataatcttggttctcctaaagattatcaaaacatgtgcgtggaaatt
attgtcggcggcgaaaagagcagagatactattataaaagagcttgtcgccgtgcattac
gaaagaaatgagatagaatttatccgcggaaagtttagagttaaaggcgataccgtggaa
atttttccggcttatcttgaaacggcaatccgcgtggatttttttggagacgatattgaa
agcataaaagagtttaatccccttacgggtgaaataatcgcaaaaaaaacaaaagcgtat
atttatccggcaaaacattttgttaccactcagcctaaaattgataacgctttgggaact
attaaggccgaacttgacgaaaggcttgcgctgttaaactctcaaaaaaaacttcttgaa
gcgcagcgtcttgagcagagaacaaaatacgatatggaaatgcttcgcgaaaccggtttt
tgcagcggagtagaaaattattcgcgtcatctttcaggcaaccctgcgggaacgcgtccg
acaactttaatagattattttttgcaggataataacgatttcttgatgattgccgacgag
tctcatatttcactccctcaaataagaggaatgtatgagggcgacagaagccgcaaacag
actcttgtggattttggtttcagactgccttcggcgttagacaacaggcctttgaaattt
cccgaatttgaaaagcttataagaaaatttatgatggtttccgcaacccccggagcttac
gaacttgagcgcagcaaaaaaaatataacggatttagttatacgccctacggggcttata
gaccctgaagttgtaatacgcccgatcaacgggcaaattcaggatttaatgcaggaaata
caaaagactgttgataaaaaagaaagaactcttgttacaactcttacaaaaaaaatggct
gaagatttggcgggttatttgaaagagaaaggttttaaagtagagtatttgcattccgaa
atagaaactttggatagaatagaaattcttaaaaatttacgtcttgggaaatttgatgtt
ttagtaggtataaatttgttaagagaaggtttggatttgccggaagtatctcttgtggcg
gttttggacgctgataaagaaggttttttgcgctcagagtcaacgctgatacagatttgc
ggaagagcggcaagaaatgttaacggacacgttcttttttacgctgataccatgacgggg
tctatgcaaagggctcttcaggaaatgcgccgccgccgcgacaggcagattgaatataac
gtaaaaaatcgcattacgccaaagtccataattaaagccgttcacgaccttgacgagttt
caaaatatatcgcgcgctgaaaatactgccgcaatgttaagggaagacggttttgattac
aaaattactccgaaaaatatagataaagttataagcgaaattgaagagagcatgaaagaa
gccgccgataatttagattttgaatccgcaacagttttaagagacagaatgattgaacta
aaatctatgaaatcttccaagaaaaaaataaagcagtaa
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